Vanessa cardui (painted lady): 124542893
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Entry
124542893 CDS
T09161
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcd03000
]
124542893
03036 Chromosome and associated proteins [BR:
vcd03036
]
124542893
Transcription factors [BR:
vcd03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124542893
Chromosome and associated proteins [BR:
vcd03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124542893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
Zf-C2H2_ZNF451_C
zf-C2H2_jaz
zf-C2H2_11
zf-C2H2_15
zf-C2H2_7th_ZNF462
YhfG
Motif
Other DBs
NCBI-GeneID:
124542893
NCBI-ProteinID:
XP_046976756
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Position
Z:complement(8650080..8657622)
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AA seq
658 aa
AA seq
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MPPPDKKSATKGKTILQSYLNSFDQDNEETTTVIAVNGSGDEEADTGVTYFVDEEGRYYY
QQAGDNQNLVSIPAEVTQDNEEISEESQMLVEGDSYQTVTLVPSETGNGEVSYVLVMQDE
NKPVMNIDIKVDQEEKGNDVYTFEEEEEGDQEGSEDGDEPVKPKSSTSKRSKCVRPHFTC
NFCTYTSHRRYLLLRHMKSHSEERPHKCSICERGFKTIASLQNHVNMHNGVKPHVCKYCK
SPFTTSGELVRHVRYRHTHEKPHKCSECDYASVELSKLRRHVRCHTGERPYQCPHCTYAS
QDTFKLKRHLRTHTGEKPYKCDHCNMCFTQSNSLKAHKLIHNVSEKPVFACELCPTKCGR
KTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYSCKMHNKTHEGEKCFKCELCPYASTTLRH
LKSHMLKHTDEKPFVCDQCDQSFRQKQLLRRHQNLYHNPNYEPKPPKEKTHTCHECKRTF
AHNGNLIRHLAIHDPESGHHERALALKLGRQRKIKIIDGNVKLDDSSNDGDITKIELGNN
ELKRGELVTVADGEGQQYVVLEVIQLEDGTEQQVAVVAPDYMEEEEQEEEEEEEEEEDEE
DEMEKKQAYIEQAKQKNLERSIKLEKDVDTCFGFDEDDEPEDEEEEITYSENVVLRLV
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaccagataagaaaagtgcaactaaaggaaaaacaatactacaatcttatttg
aactcttttgaccaagataatgaagaaacaactacagtaattgctgtaaatggcagtggt
gatgaagaagcagatacaggtgtaacatactttgtggatgaagaagggcgttactattac
cagcaagctggtgacaatcaaaatcttgtttctataccagcagaagtaactcaagacaat
gaagagatatcagaagagtcacagatgctggtggaaggggatagttatcaaactgtcaca
ttggtaccgtcagaaacaggaaatggtgaagtcagctatgtgctagtaatgcaagatgaa
aataaaccagtaatgaacattgatataaaggtggatcaggaggaaaagggtaatgatgtg
tacacttttgaagaggaagaggaaggcgatcaagagggttctgaagatggcgatgaacct
gtaaagcccaaaagttcaacttcaaaacgcagcaagtgtgtgcgaccacatttcacatgc
aatttctgtacttacacaagtcacaggcggtaccttttgctgcgccacatgaaatcacat
tcagaggaacgaccacacaagtgcagtatttgcgagcgtggctttaaaacgattgcatct
ctgcagaaccatgtcaacatgcataatggtgttaaacctcatgtttgcaaatactgcaaa
agcccttttactacttcaggagaattggtgcgacatgttcgctaccgtcatacacacgag
aagcctcacaaatgctccgagtgtgattatgcttctgtagagctttcgaaactacgacgt
catgtgcgttgtcacactggagaaagaccataccagtgccctcattgtacatatgcctct
caagatacattcaagctgaaaagacatttgcgcacacatactggggagaagccttacaaa
tgtgatcattgcaacatgtgttttacacaatccaactctcttaaagctcataagctgata
cacaatgtatcagagaaaccagtgtttgcatgtgaactttgtccaacaaaatgcgggcgt
aaaacggatttgcgcatacatgtgcaaaaattgcatacttctgataaacctcttaagtgc
aaaagatgtggaaaatcattcccagaccgatattcgtgtaaaatgcataacaagacgcat
gaaggtgagaagtgtttcaaatgcgagctatgtccatatgcgtcaacgactctacgtcat
ctcaagtcgcacatgctcaaacacacggacgagaagcccttcgtatgtgatcagtgtgac
cagtcatttaggcaaaagcaactattgcgccgccatcaaaacttgtaccacaaccccaat
tatgagccaaagcctcctaaggagaagacacacacatgccatgaatgcaaacggacattt
gcgcacaacggcaatttaatcaggcatcttgctattcatgatccagaatcaggccaccat
gagagagcccttgcccttaaacttggtcgtcagaggaaaattaaaattattgatggaaat
gtgaagttggacgactccagcaatgacggggatataacaaagatagaattaggcaacaat
gaactcaaacgtggcgagctagtgacagtggcagatggtgaagggcagcaatacgttgtg
ctcgaagtgatccagctggaagatggcactgagcagcaggtcgctgtcgttgcccctgat
tatatggaggaagaggaacaagaagaagaagaggaagaggaggaagaagaggatgaagaa
gatgaaatggaaaagaaacaggcttacattgagcaagctaagcagaaaaatttagaaagg
agcattaaacttgaaaaggatgtagatacttgctttggctttgatgaggatgatgaacca
gaagatgaagaggaagaaataacctatagcgaaaatgttgtattacgtttagtttaa
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