Vanessa cardui (painted lady): 124543143
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Entry
124543143 CDS
T09161
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vcd04040
]
124543143
Ion channels [BR:
vcd04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124543143
BRITE hierarchy
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
124543143
NCBI-ProteinID:
XP_046977169
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Position
Z:5452340..5528477
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AA seq
1210 aa
AA seq
DB search
MWLFRTKRERLPTSTCDGPAIVSAPDGAVPAVQVVSQMYNVMPRKRGLIGWLWALTGHRR
EPCMKPDVGGEMQVMLPNQAQDIISSGDVCLLAESPYRILRAAESGNVEDFKRLYLTEPS
RLSVRDTRGRTAAHQAAARNNTNILQFIVRYGGNLNISDNSGNTPLHVAVENGSLDAIEF
LLNHKVDTSILNEKSQGPLHLATELNKVAVLQLFVKYKSAFNVDLGGEHGRTALHFAAIH
DHDICARILITELGAECKRPCNNGYYPIHEAAKNASSRTMEIFLQWGESKGCTREQMISL
YDNEGNVPLHSAVHGGDIRAVELCLKSGAKISTQQYDLSTPVHLACAQGALEIIELMFRI
QPEEKDACLKSCDVQKMTPLHCAAMFDHPDIVSFLVAQGSDLNPLDKERRSPLLLAASRA
GWRTVQVLIRLGADVELKDVNNRNVLHLVVMNGGRLEDFAATCKNLCESSLTKLLNEKDN
TGCSPLHYASRAGHIRSLQNLIKLGACINLKNNNNESPLHFAARYGRYNTVCQLLDSDKG
AFVINESDGEGLTPLHIASREGHSRVVHLLLNRGALLHRDHSGRNPLHLAAMFGYTQTIE
LLHSVHSHLLDQSDKDGNSPLHLATMENKPNSIALLLSMGCRLSYNNLDLSAIDYAIYYK
FPEAALAMVTHEQRANEVMALRSDRYPCVTLALIAGMPNVFEAVQDNCITKANCKKDSKS
FYIKYNFRVFCPKTKTDDDSNRKPDSSLKSQNIPLAALNAMVAHGRVELLAHPLSQKYLQ
MKWNSYGKYFHLANVLFYCIYLTFVTLFTYKLMSKPIVDDNKLNETDIDFGFNGTNSTDI
ADKKDFETMIAIYASTVAVLFYNFMCLIREMCNMKEQKLHYIVDPSNFVSWTLYVSSTLT
VIPTIYPIYGDIQLSAASITIFLSWFHLLLLLQRFDQVGIYVVMFLEILQTLIKVLMVFS
ILIIAFGLAFYVLLSKGQHLSFSTIPMSLIRTFAMMLGELDFVGTYVQPYYKSESETDLP
FPLPTFFILVLFMVFMPILLMNLLIGLAVGDIESVRRNAQLKRLAMQVVLHTELERKLPK
ICLDRVDKDELIEYPNNKKCKLGFVDFILRKWFCNPFSDEGNGLDLVLENSEDYIAAELD
KQKRRLREMSKSLDQQYTLLRLIVQKMEIKTEADDVDEGVSTTETRVVPRWSSPRIRKKL
RSASSFNRGG
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgtggctctttcgaacgaagagggagaggttgcctacttcgacttgcgacggcccagcg
attgtatcagcgcctgacggagctgtgcctgctgtgcaggttgtctcgcaaatgtacaac
gtgatgccgagaaaaagagggctcattggctggctgtgggccctcacgggtcaccgacgg
gaaccatgtatgaaaccagatgtaggaggagagatgcaagtgatgttacccaatcaagcc
caggatataattagttcaggcgacgtgtgcttattagctgagagtccgtacaggatactt
agggcggctgaaagcggcaatgtggaagacttcaagcggttgtatttgacagaaccctct
cgtctatcagtgcgggacacgcgtgggcgcaccgcggctcatcaagcagcagccaggaat
aacacaaatatattgcagttcatcgttcgctacggtggcaatttgaacatctctgacaac
tctgggaacacaccgttacatgtggctgtcgagaatggttcactggatgcgatagaattc
ctgctaaaccataaagtcgacacaagcatcttgaatgaaaaatcacaaggacctctacat
ctcgccactgaactcaataaggtggcagttctgcaactgtttgttaaatacaaatctgcg
tttaacgttgatctcggcggcgaacatggacgtaccgcactgcactttgcagccatacac
gatcatgatatatgcgccaggattttgattactgaactcggcgcagaatgtaaacgcccg
tgtaacaatggttactatccaatacatgaagctgcaaaaaacgcttcatctagaacaatg
gaaatatttctgcaatggggggagtcgaagggttgtacaagagaacaaatgatttctcta
tatgacaatgaagggaacgttcccttgcattcggctgtacacggaggagatataagagct
gttgaactatgcttgaagtcaggtgcaaagatatctacccaacagtatgatttgtccacg
ccagtgcatcttgcgtgtgcgcagggggctctcgagattatcgagctaatgtttcgtata
caaccagaagaaaaggatgcctgcctgaaatcatgcgacgtgcaaaagatgaccccgctt
cactgcgccgctatgtttgaccatcccgatattgttagctttcttgtcgctcagggctcg
gacttaaatcctttagataaagaaaggagatctccattacttctagccgcttcaagagct
gggtggaggacagttcaagttttgattcgtcttggagctgatgtagaacttaaggatgta
aacaaccgtaatgtcctgcatctcgtcgtgatgaatggaggacgcttggaggattttgcg
gctacttgcaagaatctttgcgagagcagcttaacgaagcttcttaatgaaaaagataac
acgggctgttctcccctccactacgccagtcgcgccggacacatacggtcccttcagaat
cttataaaactcggcgcctgtataaaccttaagaacaataacaacgagagtccattgcac
tttgctgccagatatggacgatacaacaccgtgtgtcaattgctagattcagataaaggt
gctttcgttataaacgagagcgatggtgagggtctcactccactgcacatcgcctctcgt
gagggacattcgagggtcgtacaccttctgctcaaccgtggggcactgttgcacagagat
cacagcggccgcaacccgctccatctagcggccatgttcggatacacgcagacaatagaa
cttctacactcggtccattcacacttacttgatcagtcggataaagatggaaattcgccc
ctacatttagctacaatggaaaacaaaccaaactctatagcattactgctatctatggga
tgtcgcttgagttacaataacctggacttgagcgctatcgactatgccatctattataaa
ttccctgaagcagctctcgctatggtgactcatgaacaaagggcaaatgaagtaatggcc
ttacgatcagatcggtacccttgcgtcacactcgcactcatagctggcatgcccaatgtg
tttgaagcggtgcaggacaattgtatcactaaggctaactgcaagaaggactctaaaagc
ttctacatcaaatacaactttcgggtgttctgcccgaaaacaaaaaccgatgatgatagc
aacagaaagcccgacagttctctgaaatcccagaatatacctttagcagccctgaatgct
atggtagctcatggtcgtgtagaactgctagctcatcccttgagccaaaaataccttcag
atgaagtggaactcgtatgggaaatatttccacctagcaaatgtacttttctattgcatt
tatctaactttcgtcacactcttcacttataagttgatgagtaagcctattgttgatgat
aataaattgaatgaaactgacattgattttggattcaatggaactaattcaacagacatc
gcagacaaaaaagatttcgaaactatgatcgctatctatgcaagcacggttgccgttctt
ttctacaacttcatgtgtctcatacgagaaatgtgcaacatgaaagagcagaaactgcac
tatattgtcgacccttcaaatttcgtctcatggactttatatgtgagctcaacgctgacg
gtaataccaacgatatatcccatatacggagacatacagctatcagcagcgtcaataaca
atatttctgtcctggttccatcttctactccttctccaacgtttcgatcaagtcggaata
tacgtagtgatgttccttgagatattgcaaactctgattaaagtcttgatggtgttttcg
attctcattatagcttttgggctagctttctacgtactgttatcaaaaggtcagcacttg
tcatttagcacgataccaatgtctctgatccgcacgttcgcgatgatgctgggggaattg
gacttcgttggaacctacgttcagccatattacaaatcggagagcgaaactgacctgccg
ttcccactaccgacgtttttcattctcgtgcttttcatggtgtttatgccgatactgttg
atgaatctactcatcggtctggctgttggtgacatcgagagtgtacgacgcaacgctcaa
ctcaaacgcctagctatgcaagtggtcctgcatactgaactggaaaggaagttgcccaag
atatgcctcgacagggtggacaaggacgaacttatcgaatatccgaataataagaaatgt
aagcttggattcgttgattttatcttgcgaaaatggttctgcaatccattttctgacgaa
ggtaatggcctggatctggttttggagaatagtgaggattatatagctgctgaactggac
aagcaaaagcgtcgacttcgggaaatgtcaaaatctctcgaccaacaatacactctgttg
cggctgattgtacagaaaatggagataaagaccgaggcggacgacgttgatgagggcgtt
tccacgacggaaacccgcgtcgttccgcgctggagctcacctcgtatccgcaagaaactg
cggtcggcctcttccttcaaccggggaggttaa
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