Vanessa cardui (painted lady): 124543707
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Entry
124543707 CDS
T09161
Name
(RefSeq) pre-mRNA-splicing factor Slu7
KO
K12819
pre-mRNA-processing factor SLU7
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124543707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcd03041
]
124543707
Spliceosome [BR:
vcd03041
]
Complex C
Other components
Step II factors
124543707
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slu7
SR-25
zf-CCHC_4
DUF2126
Motif
Other DBs
NCBI-GeneID:
124543707
NCBI-ProteinID:
XP_046977936
LinkDB
All DBs
Position
3:1765889..1777584
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AA seq
572 aa
AA seq
DB search
MTTNARVAVSQILRNKDETADEEDEPKKKSREDWRKAKELEEARKAGTAPAAVDETGKDI
NPHIPQYISSAPWYYGTSGPTLKHQRPQEDREGQFTRLDTYYNKGVTGNVSIKFRKGACE
NCGAMTHKKKDCLERPRKIGAKFTNAGIAPDEFNQPNLNLSYDGKRDRWNGYNPEQHKAI
IEEYQKVEEAKRELRAQKLEQDPTATEEDDREGEDEDKYVDEVDMPGTKVDSKQRITVRN
LRIREDTAKYLRNLDLNSAYYDPKTRSMRDNPIPEASDFEYGGENLSRFSGDTRSHAAAQ
LFAWEAHAKGLDVHLLAEPTKLQLLQKQYEDRRDEFKARVKQSVLDKYGGEEHLRAPPRE
LLMAQSELFVRYNRDGSRAATAEKQLAKSKYEEDVMINNHTSVWGSFWKDGQWGYKCCHS
FIKMSYCVGEAGKSMVMEVPDTSKEIIQNVEKEEVPEKSEKSSSSEHSSDSGSESEKDKR
SKTEKTSKKKKNKKKSKKKKKKEQKKDKQEDKLKKALEMEERKQKHAEYLLSVDERKRPY
NSMMEVKEPTEEEMEAYMMKRRREEDPMSQFM
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgactaccaatgcgcgagtggctgtgtcacaaatacttcgcaataaggatgaaactgct
gatgaagaagatgaacctaaaaagaagtcccgtgaggactggaggaaggctaaagagtta
gaagaggcccgtaaagctggtacagcaccggctgctgttgatgaaacgggaaaagatata
aatcctcacatacctcaatatatatcttcggccccatggtactatggtacatctgggccc
acactaaaacaccaacggccacaagaagacagagaggggcagttcaccagacttgacaca
tattacaataaaggtgttacagggaatgtatctataaagtttagaaaaggagcctgtgag
aattgtggggcaatgacacacaagaagaaagattgcttggagagacccagaaaaattgga
gccaaattcacaaatgcgggaatagctcccgatgagttcaatcagccaaatctaaacctt
agctacgatggcaagcgtgatcgttggaatggctacaacccagaacagcacaaggctatc
attgaggagtaccagaaagtggaagaggctaagagggaattacgagctcaaaaactagaa
caggacccaactgcaacagaagaagacgacagagaaggggaggatgaagacaaatatgtg
gacgaagtggacatgccgggtaccaaagtggattccaaacaacgtatcacggtccgaaac
ttgcgtatcagagaggacaccgccaagtacctccgcaacttggacctcaactccgcgtac
tacgaccctaagacgcgttccatgagggacaatccaatacctgaggcctctgacttcgag
tacggcggcgagaacctgtcgcgcttctcgggcgacacgcgctcgcacgcggccgctcag
ctgttcgcctgggaggcgcacgcgaaggggctcgacgtgcacctgctcgccgagcccacg
aagctgcagctgcttcagaagcaatacgaggacaggcgcgacgagttcaaggcgcgcgtc
aagcagtccgtgctggacaagtacggtggcgaggagcacctgcgcgcgccgccgcgcgag
ctgctgatggcgcagagcgagctctttgtgcgctacaaccgcgacggcagccgcgccgcc
acagccgagaagcagctcgccaagagtaaatatgaggaggatgttatgatcaacaaccac
acatcggtgtggggttcattctggaaggatggccagtggggatacaagtgctgccactcc
tttataaagatgtcatactgtgttggggaggctggaaaatcaatggtcatggaagtacct
gataccagcaaggaaataattcaaaatgttgaaaaggaagaagttccagaaaaatctgaa
aagtcatcgtcctccgagcacagttccgatagcggttctgaatcagaaaaagataaaaga
tcaaagacagaaaaaactagcaagaaaaagaaaaataagaagaagtcaaagaagaagaaa
aagaaggaacaaaagaaagacaagcaggaagataaattgaaaaaggccctagagatggag
gagagaaaacagaaacatgccgagtatctactgtctgtggatgaaaggaaacgtccatac
aacagcatgatggaagtcaaggagcccacggaggaggaaatggaggcctatatgatgaag
agacgacgagaagaagatcctatgagtcagtttatgtga
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