Vanessa cardui (painted lady): 124543739
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Entry
124543739 CDS
T09161
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcd04131
]
124543739
Membrane trafficking [BR:
vcd04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124543739
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
124543739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
Synaptobrevin
Beta-prop_HPS5
Lgl_C
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
PEP5_VPS11_N
DLP_helical
Motif
Other DBs
NCBI-GeneID:
124543739
NCBI-ProteinID:
XP_046977975
LinkDB
All DBs
Position
3:complement(443543..726544)
Genome browser
AA seq
1366 aa
AA seq
DB search
MKKFTFKGVLDGFRSSVQAAPRGTEQEIQETLRPDHFQIKKTFRHGFPFSPTALAWDPVQ
KLLAVGDKGGNLRLLGGPGVDAHVRHEAGEAVLHVKFLINEGALVTATADDQLHLWTFRQ
KIAQRVQSLKFQRERYYIKLSRQTKELKGITCLHLPLQSKWIHVGTERGNVHVVNIETFA
LSGYVINWNKAIEVTRPNHPGAVVDVSENPLDASKLVIAYESGLVVVWDLRARAAEWRGS
LGTSGPGEAVRAAAWQHDAKLMTAHADGALATWSMRSPRPTSLSYPHAKANKDGKPEPCK
PILRLEWKTSRTGESLVIFSGGLPTDKAGRTHSITVLNGKSTTVLEMEHSVVDFVTLCES
PHAADYQEPYAIVVLLQNDLVVIDLLTPGYPCFENPYPMDIHESPVTCCCYFADCPSDLI
PAFYSVGRQGNKKAAGFSEKLWPINGGEWAPASCSYSEIILTGHADGSVKFWDASAGTLQ
ILYKLKCSKVFERRGGYEEESPLAVQQAALCAESRRLCVALPHGHVVLFKFRKAEVHAET
HVVEVPVITDAVEEETSPEVESGRSTSLGRGAESVEGEGRRSGSWAGSALRVRGCAGTGG
ARRAPGFQAALVALQHGPPHPVTALTLNSSYGLMAWGGERGVVVLDVWRRCVVAALPAHA
LYLPHPEAPLARHERRSPELDQLEESPASPEPAEEALPDPKLDTRRKSTPWKNFNLKRQI
SKVDLKLKAAFGPQENEETIEKGNSQFYCETAATAEVAPESTTDSPEADDAGERRPDDDK
SQLSSPLRVCSDVFERMHRELQEKRATDVYDRMHKELQERWQDKERGEITPDISPSRIGD
DEKATRPDNLPLFDEDGKPLRPPRSKAKRKEDSTKDQRDQRLLSVPNIKYNKQESVKDLR
KKQATQQSQSFAGNLMRRFREFVARLCTRNERNVEEELNEVIQVPNIIGRVDKLDSSFSR
SRSSSMSSLENISQEGIQCLAFADSYTKRSDPTTLLPTLWIGTTLGSVLTMMISLPEADL
RHTQPVVISTSGGPIFRLKGSILAMSFLDCNGALIPYSYESWKDDSKDGRERRERTPTKQ
SSSGSSHMSPPPSGAEAAADRQFVVIASEKQARVVALPSQNCVYRQQIVDTDFVVKSEIV
SLKDSVCLVNYLSTGHLAAYSLPSLRPLVHTDFLPLSELSFQTQSKQRGIVDPMLSIWGQ
QLIVNEDTDQIAKTFCFSNRGHGLYLASPTEIQKFTIDAEFCQQLNEMIGELFLPRDMPE
PPKESFFRGLFGGGSRPLDREELFGESSGKPSRSVAKHIPGVEGAGQRVAAATSEVARAH
QMVVERGDKLSQLEDRAERMHSQASEFSSSAHQLMLKYKDKKWYQL
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcactttcaagggcgtgctggacgggttccggagctcggtgcaggcggcg
ccgcgcgggaccgagcaggaaatacaggagaccttgcgtccggatcacttccagattaaa
aagacattccgccatggattcccgttttcgccgacggctctggcgtgggatcccgtacag
aagctactggcggttggtgataaaggcggcaacctcagattactaggtggtcccggagtg
gacgcgcacgtgcgccacgaggccggcgaggcggtgctgcatgtgaagttcctgatcaac
gaaggtgctctcgtcacggccaccgctgacgaccaactccacctctggaccttcaggcag
aagatagcacaaagggtccaatcgctcaaattccagagagaacgatattacatcaaacta
tcacgacagactaaagaactgaaggggataacctgcctgcacttgccgctccaatcgaaa
tggatccacgtgggcacggagcgcgggaacgtccacgtggtaaacatcgaaacgttcgcg
ctgagcggctacgtcatcaactggaacaaagccatcgaagtaacgaggccaaaccacccg
ggcgccgtcgtcgacgtcagcgaaaatccactggacgccagcaaattagtaattgcgtat
gaatcgggcctggtggtggtatgggatctgcgggcgcgggccgcggagtggagaggctcg
ctgggcacgagcgggcccggcgaggccgtgcgcgccgcggcgtggcagcacgacgcaaag
ctcatgaccgcgcacgcggacggcgcgctcgccacgtggagcatgcgctctccaagaccc
acctccttgtcttatccgcatgcgaaagcaaacaaagacggcaaaccagaaccctgcaaa
cctatactcagactggaatggaaaacttcaaggacaggagaaagtctggtgatattctcc
ggcggcctgcccaccgacaaagctggccggacgcacagcatcacggttctcaacggaaag
agcaccaccgtgctggagatggagcacagcgtggtcgacttcgtcaccctctgcgaaagc
ccccacgctgccgattatcaagaaccatacgcgatagtggtgctactgcagaacgacctg
gttgtaatagatctgcttacccccggctacccctgcttcgagaacccctaccccatggac
atacacgaatcacctgttacatgctgttgttactttgctgactgcccttcggatttgatt
ccagcattctactcagtgggacgacaaggcaacaagaaggcggccggcttcagcgagaag
ctgtggcccatcaacggcggcgagtgggcgccggcctcgtgctcctacagcgaaattata
ctcactgggcacgcagatggcagtgtgaaattttgggacgcgagtgcggggactttacaa
attctgtacaaattaaaatgttcgaaagtgttcgagcggcgcgggggctacgaggaggag
tccccgctggccgtgcagcaggccgcgctgtgcgccgagtcgcgccgcctgtgcgtggcg
ctgccgcacggacacgtcgtgctcttcaagttccgcaaggccgaggtgcacgccgagacg
cacgtcgtagaggtgccggtgataaccgacgcggtggaggaggagacgtccccagaggtg
gagagcggccggtccacctccctcggcaggggcgcggagagcgtggagggcgagggccga
aggtcgggctcgtgggcgggcagcgcgctgcgcgtgcgcggctgcgcgggcacgggcggc
gcgcggcgggcgcccggcttccaggcggcgctggtggcgctgcagcacggcccgccgcac
cccgtcacggcgctcacgctcaactcgtcgtacggcctcatggcgtggggcggcgagcgc
ggcgtggtggtgctggacgtgtggcggcgctgcgtggtggcggcgctgccggcgcacgcg
ctgtacctgccgcacccggaggcgccgctggcgcgccacgagcgccgctcgcccgagctg
gaccagttggaggagtcacccgccagccccgagcctgccgaggaagcactgccagaccca
aagcttgacacgagacgcaaatccacaccttggaagaacttcaatttaaaacgtcaaatt
tctaaagtggaccttaagctcaaagctgccttcggaccgcaagaaaatgaggaaaccatt
gaaaaagggaattcacaattctattgtgaaacggctgctactgccgaggtggcgcctgaa
tctaccaccgactcgcccgaagccgacgatgcgggagaaaggagacctgacgacgataaa
agccaactgtcctcgcctttacgagtttgttccgatgtcttcgagcgaatgcatcgagaa
ctacaagagaaacgagctacggacgtttatgacagaatgcataaagaactccaggaaaga
tggcaggacaaagaacgaggtgaaataacgcctgatatatccccctctcggatcggagac
gacgaaaaagctacacgacctgacaatctacctctttttgatgaagacggcaagccgctg
cgaccgcctcgctcgaaagccaagagaaaagaggacagcacaaaggaccagagagaccag
aggttgctctcagtgcccaatattaagtacaacaagcaggagtcggtaaaggacctgcga
aagaagcaagcgacccagcaatcgcagtcgttcgccggcaacctgatgcggcgcttcaga
gagtttgtagcgcgactttgcacgagaaacgaacgaaatgtcgaagaggaattaaacgaa
gtgatacaagtgcccaacataataggccgcgtagacaagctggacagttcgttctcgcgg
tcgcgctccagctccatgtcgagtcttgagaacatatcgcaggaaggcattcagtgcctc
gcctttgccgacagctatacgaagagatcggatcccacgacgttgctgccgaccttgtgg
ataggaacgacgttgggctcggtgctcacaatgatgatcagcttgccggaagctgacctg
cgccacacgcagccagtcgttatttccacgagcggcggtccaatatttaggttaaagggt
tcaatattggccatgtcatttttggattgtaatggtgctttaattccttactcgtacgag
agctggaaggacgacagtaaagacgggcgggagcggcgcgagcgcacgcccactaagcag
agctcgtcaggcagcagccacatgagcccgccgccttccggcgcggaggcagccgctgat
cgccagttcgtggttatcgcctcggagaaacaggcgcgcgtcgtggcgctgccgagccag
aactgtgtctaccgccaacagattgtcgatactgactttgttgtaaaatctgagattgtt
agcttgaaagatagcgtctgcctggtgaactacttgtcgacgggtcacttagcggcgtac
agcctcccctccctgcggcccctcgtgcacacggactttctgccgctctctgagctcagc
ttccagacacagtccaaacagaggggtatcgtagaccctatgctctccatatggggccag
caactgatagttaacgaggacacggaccaaatagcgaagacgttctgcttcagtaaccgc
ggacacggcctctacctcgcctcgcccacggaaatacaaaagttcactatcgacgctgag
ttctgtcagcaactaaacgaaatgatcggagagctgttcctgccgcgggacatgcccgag
ccgcccaaggagagcttctttcgagggctgttcggcggcgggtcccggccgctcgaccgg
gaggagctgttcggcgagagcagcggcaagccgagccgcagcgtggccaagcacatcccg
ggcgtggagggcgcggggcagcgcgtggcggcggccaccagcgaggtggcgcgcgcgcac
cagatggtggtggagcgcggcgacaagctgtcgcagctggaggaccgcgccgagcgcatg
cactcgcaggcctccgagttctccagctcggcgcaccagctcatgctcaagtacaaggac
aagaagtggtaccagctgtga
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