Vanessa cardui (painted lady): 124543987
Help
Entry
124543987 CDS
T09161
Symbol
tho2
Name
(RefSeq) THO complex subunit 2-like protein isoform X1
KO
K12879
THO complex subunit 2
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03013
Nucleocytoplasmic transport
vcd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124543987 (tho2)
09122 Translation
03013 Nucleocytoplasmic transport
124543987 (tho2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcd03019
]
124543987 (tho2)
03041 Spliceosome [BR:
vcd03041
]
124543987 (tho2)
Messenger RNA biogenesis [BR:
vcd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
124543987 (tho2)
Spliceosome [BR:
vcd03041
]
Complex C
Other components
EJC/TREX
124543987 (tho2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
124543987 (tho2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
124543987
NCBI-ProteinID:
XP_046978262
LinkDB
All DBs
Position
4:7880471..7898619
Genome browser
AA seq
1416 aa
AA seq
DB search
MGASTKFISDYCKTWEKSGRDQFIKSVTQYVKDEGKTPLFSKSGKLSGLSQSIYDLLSCG
LRGLLKKDSVISVLKDIIVSHADLPSILLDVVCILDSETSMDIHSEERNNFCYLVRELES
IISDKLLKERLEIDTLQDVGTLKNKNFYTKFIKIKTKLYYKQRKFNLFREESEGYSKLIV
ELNQEISENTDWKTILEIIQSLIGCFNLDPNRVLDIILESFEARPNLDKLFISLIKNYMG
DPQVISEVLGFKLGNMEVLESYKEPPALMTVIALLLQHEVISLDDIYPWLRPDDTLMAKE
ADKELKAIQDYIRKLNIVSTKGPQSNAPAEFIEEKADPQEYWNNQKLVLCEALLNVTAWK
EFAALSARLPTTSVAQRPAVALCNMLHALVEPLYRKHCRIAPKIIGKPIPPLLSSLAPTP
CKNFEDMKETVIPALVLLGPSLHYDPILMYKIIRILRTARTLVEDPLHHEALTVLDTAIL
PALTLMEGNCCMAEEVYTLLKLYPYQCRYCLYARWKNEAGEKIPSLMRVRGNSLQRIKHI
MKRVSKENIKPQGRLIGKLSHAASAFLFDYMLLQIQTYDNLIGPVVESLKYLTSLSLDVL
GYCLVEALAARRGTVGAAHPPALQALAAFAAAAFKKHNIELTALLQFVANRLKAQQSHDL
LILKEIVQKMAGIEAAEEITPEQLDAMAGGELLKGEAGYFSQVRNTRRSSARLKEAVVGN
NLDIALCILSAQQRHCCVWKEYAEDSPSSGEPPGSQLKVVGRLADQCQDALVQLGTFLAS
SHAPDEYAARLPPLQELLRDYHVDADVAFFLHRPVLAQKIAAKAEAFRKSSDSKSESMEK
SIERYNIASKEALEPVVTSITPLLPTKVWEDISPEFYVTFWSLSMYDLRVPVESYEREIE
RLKTAASNAAKDTSQGTKGKKEQERFNTLIDKLQEERRRQEEHVSRVRARLQRECSGWFP
ARAAKSAKNETVTRLMQLCLFPRCVFTAPDALYCAEFVHTVHALKTPNFSTLLCYDRLFC
DITYSVMSCTEGEAARYGQFLCRVLRTAMRWHADRAAFHSECAHYPGFVTKYRVSNQFTE
ANDHVGYENYRHVCHKWHYKITKAMVVCLDSGDYVQIRNALIVLIRILPHFPVLAKLAQI
IEKKVEKVKEEEKTQRQDLYVLATGYSGQLRNKVPMMKESDFHQIVNLQVSAAGAAGATA
AAAGGAGGAARDEAPKTRDDEMPADVEKKETRASERRRDDSDREKESKRESRSSLKERNK
EEIRSKDRSPRERSHREERYLESVSPPHDHRHPPDDIDRDVKRRKVESSGNGKGSKEIEE
RSPEKEKRKAKLRGDERKERKMSRKRDRAEDSAILEQKRRRDEQKAVAKISSHQNGSQED
HHYEKYHKREKSPFRDRSHEEPRDKHRRSNESKIRR
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcatccactaaattcatatctgattattgtaaaacgtgggaaaaatcgggacga
gatcaatttataaaatcagttacacaatacgttaaagatgagggaaagacgcccttattt
tcaaaatccggaaaactatctggattatctcaaagcatttatgatttgttatcatgtggt
cttcggggcttgttgaaaaaggactccgttatttctgtcctgaaagatataattgtttca
catgcagacttaccatccatattattagatgtagtatgcatacttgactccgaaacatct
atggacattcacagtgaagagcgaaataacttttgttatttagtaagagagttggagtca
attatatctgacaaattattaaaggagcgcttagaaattgacacattgcaagacgttgga
acattgaaaaataaaaacttttatacaaaatttattaaaatcaaaactaagctgtattat
aagcaacgtaagttcaacttgtttagagaagaaagtgaaggatattctaagcttattgtg
gaattgaatcaggaaatttctgaaaacactgactggaagactatacttgaaattattcag
tctcttataggttgcttcaacttggatcctaacagagtcctcgacattattttagaatct
tttgaggcacggccaaacttagataaattatttatttcactcattaagaactacatgggg
gatccccaagtgatttcagaagtattaggttttaaattaggaaacatggaagtcttagaa
agttataaggaaccacctgcactaatgactgtgatagccttacttttacaacatgaagtt
atatcattagatgacatttatccatggttacgtccggatgacacactgatggccaaagaa
gctgataaggaattaaaagcaattcaagactatatcaggaagctaaatattgtttctact
aaaggacctcaaagtaatgcaccagctgaatttattgaggaaaaagctgatccccaggaa
tactggaacaatcaaaaactagtgctatgcgaagcacttttgaatgttacggcttggaaa
gagtttgctgcactatcagctcgactaccaactacaagtgtggcacaacgcccagctgta
gccctttgtaatatgctacatgctttagttgagcctctatacagaaagcattgccgtatt
gctccaaaaattataggcaaaccaatcccaccactattatcaagccttgcaccaacacct
tgcaagaattttgaagatatgaaagaaacagttataccagcacttgtactgctcggacca
tctctacattatgatcctattttaatgtataaaataattcgtattttacgaacggcacga
acattagtagaagacccactgcatcatgaagcattaacggtattagatactgccatactt
ccagctctaaccttaatggaaggtaactgttgcatggctgaagaagtttacactttgctg
aagttatacccgtatcaatgcagatattgtctatatgctcgctggaagaatgaggctggt
gaaaaaattccgtctttgatgcgcgttcgcggtaactccttacaacgtatcaagcacatt
atgaaacgagtttccaaggaaaatattaaacctcagggtcgtctcatcgggaaactgtcg
catgcggcgtccgctttcctgttcgattacatgcttttgcagatccaaacgtacgacaac
ctgatcgggcccgtggtggagtcgctgaagtacctgacgtcgctgtctctggacgtgctg
ggctactgcctggtggaggcgctggctgcgcggcgcggcacggtgggcgcggcgcacccg
ccagcgctgcaagcgctcgcagcattcgccgccgccgccttcaagaagcacaacatcgaa
ctcacagcgctgctgcagttcgttgcgaatcgcttgaaagcgcagcagagtcatgatcta
ctgattcttaaagagatagtacaaaagatggcaggtatagaagctgccgaagaaattaca
cctgaacagctggatgccatggccggtggagaacttttaaaaggagaagctgggtatttt
tcacaagttcgaaatactaggcgatcatctgctagattaaaagaggccgtggttggaaat
aaccttgacattgctctttgcatcttatctgcccaacaaaggcactgctgcgtttggaaa
gaatatgcagaagacagccccagttctggtgagccaccaggctcacaactaaaagtagtg
ggtcgacttgcagaccagtgtcaagatgcacttgtgcaattgggtacctttttagcttcc
tcgcatgcaccagacgagtatgcggctagacttccccctcttcaggaattgttacgagat
taccatgttgatgctgatgtggcattcttcctacatcgcccagtattagctcagaaaatt
gcagcgaaagcagaagcatttagaaaaagttcagatagtaaaagtgaatcaatggaaaaa
agtatagaaagatataacattgcatccaaagaggcattggagccagttgtgacttcaata
acacctctattacctactaaggtgtgggaagatatatcgccggaattttatgttactttt
tggtcattatcgatgtatgatcttcgagttccagtagagagttatgaaagagaaatagaa
cgtttgaaaactgcagcttcgaatgccgccaaagacacttctcagggaacaaaaggaaag
aaggagcaggaacgcttcaacactctcattgataaactacaggaggagcggcggcgccag
gaggagcacgtgtcgcgcgtgcgcgcgcgtctgcagcgcgagtgcagcggctggttcccc
gcgcgcgccgccaagtccgccaagaacgagactgtgacgcgcctcatgcagctctgcctg
ttcccgcgctgcgtgttcacggcgcccgacgcgctgtactgcgccgagttcgtgcacacg
gtacacgcgctcaagacgcccaacttctcgacgctgctgtgctacgacaggctcttctgc
gacatcacgtactccgtcatgtcgtgcacggagggcgaggcggcgcgctacggccagttc
ctgtgccgtgtgctgcgcacggccatgcgctggcacgccgaccgcgccgccttccacagc
gagtgcgcgcactaccccggcttcgtcaccaagtatcgcgtctccaaccagttcaccgag
gccaatgaccacgtcggatacgagaactacaggcacgtgtgtcacaaatggcattacaag
atcacgaaggccatggtggtctgtctggactcgggcgactacgtgcaaatccgcaacgca
ctcatagtacttatccgcatcctgccacacttccccgtgctcgccaagctcgcgcagatc
atagagaagaaggtcgagaaggttaaagaggaagagaaaacgcagagacaggacttatat
gttcttgcgaccggttacagcggccagttacgaaacaaagttcctatgatgaaagagagt
gattttcaccagatcgtcaacttgcaggtgagcgcggcgggcgcggccggggccacggcg
gcggcggcggggggcgcgggcggcgcggcgcgggacgaagcgcccaagacgcgggacgac
gagatgcccgcagacgtagaaaagaaagagacgagggcgagtgaaagacgtcgcgacgat
tcagaccgagagaaggagtccaaacgtgaatccagatcgtctttgaaggaaagaaacaaa
gaggagataagaagcaaagacagatctccaagagaaagatcacacagagaggaacgttat
ttggagtccgtttcgccgcctcacgatcatcgtcatccacccgatgacatagatcgagat
gtgaaacgtcgtaaagttgaaagcagcggcaatggcaagggtagcaaagaaatagaagag
cggtcaccagagaaggaaaagagaaaggctaaactaagaggggatgaaaggaaagagcgt
aagatgagtcgaaagcgggatcgagccgaagattcggctattttagaacaaaagagacgt
cgtgacgaacaaaaagctgttgccaagataagcagtcatcaaaacggttctcaagaagat
catcattatgaaaaatatcacaaaagggagaagtcacctttccgagaccgctcacacgaa
gaaccacgagacaaacataggcggtctaacgagtcgaaaattagaagataa
DBGET
integrated database retrieval system
