KEGG   Vanessa cardui (painted lady): 124544005
Entry
124544005         CDS       T09161                                 
Name
(RefSeq) exosome complex component RRP45
  KO
K03678  exosome complex component RRP45
Organism
vcd  Vanessa cardui (painted lady)
Pathway
vcd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vcd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    124544005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcd03019]
    124544005
Messenger RNA biogenesis [BR:vcd03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     124544005
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 124544005
NCBI-ProteinID: XP_046978313
LinkDB
Position
4:14214613..14220382
AA seq 375 aa
MKEVFLSNCEKSFIQKIISEGHRLDGRNYNDSRKLSITFGSGYGSCIVSLGETKILAQVS
CEVVQPKQIRPNEGILYINVEISPMAAPQFEANRQTDLTVYLNRLLEKCYKDSKCIDLES
LCIVVEEKVWSLRVDIKVLNHDGNLIECASIATLASLAHFKRPDVTRSGEKVIIHTLAEK
DPIPTVLYHYPVCSTFAIFSNNILISDPSFIEESVCTSNSEEGNINGGLLVVGMNQYKEL
CLLNLSGAAIYNTNIVHRATLSAADKCKSIVDLIKKAIIDDDNLRQKRAKINFGDIITSD
HLQSLSRKDLSICLKNFDVKEQTLQNETADSMDVDISMEPSKYDVVPSLPQTAELKAKKG
ASTWIEISSESEEED
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgaaggaagtatttttatcaaattgtgaaaaaagttttatacaaaagattatatcagag
ggacatcgattagacggcagaaactacaatgacagtcggaaactgagtataacatttggt
tctggatatggtagctgtatcgtctcactgggagaaaccaaaatattagcacaagtatca
tgtgaagttgttcaaccaaaacaaataagaccaaatgaaggtattttatatataaatgtt
gaaattagcccgatggcagcgccgcagtttgaagccaatcgtcaaacagacctcacagtt
tatctcaacagattattagaaaaatgctataaagattcaaaatgtattgatcttgaatca
ctatgtatagttgttgaagagaaggtttggtcattaagagttgatataaaagttttaaat
cacgacgggaacctcatagaatgtgccagtatagctacattagcttcattagctcacttc
aaacgtccagatgtaaccagaagtggggaaaaggtcataattcacacattagcagaaaag
gatccaataccgactgtgttatatcattacccagtgtgttcaacttttgctatattcagt
aataacattctcatatcagacccaagtttcatagaagaatctgtgtgtacaagtaattca
gaggagggaaatataaatggaggactacttgtggttggcatgaatcaatataaagaactt
tgtttattaaacctcagtggagctgcaatatataatacaaatattgtgcatagagctaca
ctcagtgctgcagataagtgtaagagtatcgttgatttgattaagaaggcaattatagat
gatgataacttaagacagaagagggctaaaatcaactttggcgacatcataacaagtgat
cacttgcaatcattgagcagaaaagatcttagcatttgccttaagaactttgacgttaaa
gaacagacattgcaaaacgaaacagcagacagtatggatgttgacataagcatggagccc
agcaaatacgacgtcgtaccatcactaccacagacggcagaattaaaggcaaagaagggt
gcttcgacctggatagaaatatcatcggaatcagaagaagaagactaa

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