Vanessa cardui (painted lady): 124544019
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Entry
124544019 CDS
T09161
Symbol
Nup50
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124544019 (Nup50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcd03019
]
124544019 (Nup50)
Messenger RNA biogenesis [BR:
vcd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124544019 (Nup50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
EVH1_PP4R3
Motif
Other DBs
NCBI-GeneID:
124544019
NCBI-ProteinID:
XP_046978345
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All DBs
Position
4:9833678..9836360
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AA seq
569 aa
AA seq
DB search
MSVKRQATTELNHENWDQDDPAEQEEETGGFKMASKEVLEKRVIRTAKRRSQATGEEPKK
SVFSGFGGFNKTQPTSFDFLAKLTNGNNTSNVSPQKSDTLATSNTFNATLTGATTTSSLS
SGIGSMTRTSTPIAKSAFGKPMNETSLFGAATTTSGFGQSVFTASKPSTAANESPFKMQS
TQSATFSSTAKLNSSAEKPAPQISSNIFGSSSTSANNTKSLFSTTNTNTTPFKTQSVSST
PPSEENKSTNKSETQEDKKLIYYSKLKGLNESVSAWIKKHVEEGPLCILTPIFRDYEKHL
KEIQGEYEKSKTENTSDDKPTNADKKITSPWGGNTNASVFPTSNVFSNNKGSTTSPEKTS
NSTTSLNNSTTVSTNNFTTTTPPSSGFSFGIKTSSANTSPFALNTATTTANANGSTPFSF
GIGKPFSFNSNIQKNEEPAKQADENEDEPPKVEYTPIVEENSVYDKKCKIFVKKDGNFVD
KGVGTLYVKKIEDSGKHQLLVRANTSLGNVLLNLILSSSIPTQRMGKNNVMMVCIPTPDA
KPPPTSILIRVKTSEEADELLETLNKYKS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgaaaagacaggcgacaaccgagttaaatcatgaaaattgggaccaggatgat
cctgccgaacaagaagaggaaacaggtggtttcaaaatggcttctaaagaagttcttgaa
aaacgtgtaatacggaccgctaaaagacgttcacaggccactggcgaagagcctaaaaag
agtgtatttagtggttttggtggctttaataaaacacaaccaacttcgtttgactttctt
gccaaattaactaatggaaacaatacttctaatgtatcaccccaaaagtctgatacttta
gcaacatctaacacatttaatgctacattaactggagcaacaacaacaagttctctgagt
agcggaataggcagtatgacaagaacttcaacacctatagccaaatcagcttttggaaaa
ccaatgaatgagacatctttatttggagcggccacaactacttcaggatttggacagtca
gtgttcactgcatctaagcctagtacagcagcaaatgagagcccatttaaaatgcaatca
acgcaaagcgcaaccttcagttcaactgcaaaattaaattctagtgctgaaaaaccagct
cctcagatatcttcaaacatatttggatcatcatctacaagtgctaataatacaaaatcc
cttttttctaccacaaatactaatacaacaccatttaaaacacaatcagtttcaagtacg
ccaccaagtgaagaaaataagtcaacaaataagtcagaaactcaagaggataaaaagttg
atatattacagtaaattaaaaggcctaaatgaaagtgtctcagcttggatcaaaaaacat
gttgaagaaggtcctttatgtattttaacacctatctttagagattatgagaaacattta
aaagaaattcaaggtgaatatgagaaaagcaaaacggaaaacacatctgatgataaacca
acaaatgctgataagaaaattacttcaccatggggtggtaacacaaatgcctcagtattt
cccacttcaaatgtattttcaaataataaaggtagtacaacatctccagaaaaaacatca
aattcaacaacaagcctaaacaattccaccactgtatcaacaaataactttacaactaca
actccgccaagcagtggattctcatttggaataaaaacatcatctgcaaacacatcacca
tttgcactgaatacagcaacgaccacagctaatgctaatggaagtactcctttctcattt
ggtattggaaaaccattcagttttaattcaaatattcagaaaaatgaggaaccagctaaa
caagctgatgaaaatgaagatgaaccaccaaaagttgaatatacacctattgtagaagaa
aatagtgtttatgataaaaaatgtaaaatatttgtaaagaaagatggaaattttgttgat
aaaggtgttggcacactgtatgttaagaaaatagaagacagtggtaagcatcagttgctt
gtacgagccaatacatctttaggaaatgttctactgaatttgatattgagttcatccata
cctactcagcgtatgggtaaaaataatgtcatgatggtttgtattcctactccagatgca
aaacccccacctacatctattcttataagagtaaaaacatctgaagaagcagatgaacta
ttagaaacattaaataaatacaaatcataa
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