Vanessa cardui (painted lady): 124544139
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Entry
124544139 CDS
T09161
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124544139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcd03019
]
124544139
Messenger RNA biogenesis [BR:
vcd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124544139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
124544139
NCBI-ProteinID:
XP_046978550
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All DBs
Position
4:complement(8103069..8104807)
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AA seq
280 aa
AA seq
DB search
MAEVYKLIHPVKYFNDYINRNVRPDGRKFDDQRDIKLNVNAIKSADASAVVKCGNTTVVC
GIKLELAKPRAEEPELGFFVTNVELLPLCSSKFRPGPPSDHAQVVSNIVSDICVNSKSVN
LKDLCIVPDKLAWVVYCDMVCLDNDGSIVDACMITLMTSLKSLTLPKVNYDIETEEIVVD
TSVRTPLNITGLPIATSFAVYQQSPRSIVLIDPSADEEEMCGGVGANLIICCNDEQFCGI
QKFGGSNLSTEAEKKTLAIAKERSKLVGKVIETCLKNEIK
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagtatacaaacttattcatccagtaaagtactttaatgattatattaatcgc
aatgtacgacctgacggcagaaaatttgatgatcaacgtgacataaagctcaatgttaac
gcaataaaatcggccgatgcctcggctgttgtaaaatgtggaaatactactgttgtttgt
ggcataaaattggaattagcgaaacctagagcagaggagcccgaattaggttttttcgtt
accaatgtagaacttctaccactgtgttcttctaaattccggccaggcccaccttcagac
catgctcaagttgttagcaatatagtttctgatatatgtgtaaactcaaaatctgttaat
ttaaaagatttatgtattgtgcctgacaaattagcctgggtagtatattgcgatatggtc
tgcttagataatgatggaagtatagtggatgcttgtatgataacattaatgacaagctta
aaatcattgacattaccaaaggtgaattatgatattgaaactgaggaaattgtagtagat
acaagtgttaggacacccctaaatattactggcctgcctattgcaacaagttttgcagtt
tatcagcaatccccaaggagtatagtattgattgatccttcagcagatgaagaagaaatg
tgtggtggtgttggagcaaatttaataatttgttgtaatgatgaacagttttgtggaatt
caaaagtttggtggcagtaatctttcaactgaagctgagaaaaaaacattagcaatagca
aaagagagaagtaaacttgttggtaaagttattgagacatgtttaaaaaatgaaataaaa
tga
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