Vanessa cardui (painted lady): 124544144
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Entry
124544144 CDS
T09161
Name
(RefSeq) DEAD-box helicase Dbp80
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03013
Nucleocytoplasmic transport
vcd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124544144
03015 mRNA surveillance pathway
124544144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcd03019
]
124544144
Enzymes [BR:
vcd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124544144
Messenger RNA biogenesis [BR:
vcd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124544144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
124544144
NCBI-ProteinID:
XP_046978556
LinkDB
All DBs
Position
4:6804362..6806374
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AA seq
467 aa
AA seq
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MANQWGQKAEELEISNKVAGLGLAKKGSSQTSDTPEDSPDAANPAETSLLMKIIRQGLVE
SKLDIEIQRKDPNSPLYSVKTFEALHLKPNLLKGVYAMGFNAPSKIQETALPTLLADPPQ
NMIAQSQSGTGKTAAFVLAMLSRVDPSKNYPQVLCLSPTYELAIQTGEVAAKMAKFCPEI
KLKYAVRGEEVPKGTKITDHILIGTPGKMLDWGVKFGMFDLNKIRVFVLDEADVMIDRQG
HQDQCIRIHKCLPPTCQMMFFSATYDSAVMVFAEIIVPNPIIIRLLREEESLDNIKQYYV
KCKSSEEKYRAICNIYGVITIGQAIIFCHTRKTASWLSEKMSKDGHSVAVLSGELTVEQR
IAVLDRFRGGLEKVLITTNVLSRGIDVEQVTLVVNFDMPMDMNKKADCETYLHRIGRTGR
FGKAGIAINLIDSPQAMDICLDIEAHFGKKIQLLDIEDAEEIEKIGA
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccaatggggtcaaaaggcagaggagttggaaatttccaacaaagttgcagga
cttggattagcaaaaaagggatccagtcaaacttcggatactcctgaagattctccggac
gcagcaaatcctgctgaaacttcattattgatgaagataattcgtcaaggtttagttgaa
tctaaattagacattgaaatacaaaggaaagatcctaattctcctctttactctgttaaa
acttttgaagctcttcatttaaaaccgaatttactgaaaggtgtttatgccatgggtttt
aatgctccatcaaaaattcaagaaacagcgttgcctacattattagctgatcctccacag
aatatgattgcacaatcacaatcagggactggtaaaaccgctgcatttgtattagctatg
ttaagcagggtagatccttctaaaaattatccccaagtcttatgcctcagtcctacctat
gaacttgctatacaaactggagaggtagcagccaagatggcaaaattttgccctgagata
aaattaaaatatgctgtaagaggtgaagaagttcctaagggaactaaaattactgaccat
atacttattggaaccccaggtaagatgttagattggggtgttaagtttggaatgtttgat
ttgaacaaaatcagagtatttgtattagatgaagctgatgttatgattgatcgtcaagga
catcaagaccaatgtatccgtattcataaatgccttcctcccacttgtcaaatgatgttc
ttctcagctacatatgatagtgctgttatggtatttgctgaaataatagtacccaatcca
ataataatcagattattaagggaagaagaatctttagataatataaaacaatattatgtt
aaatgtaaaagttcagaagagaaatacagagctatttgtaatatttatggtgtgataaca
attggtcaagcaatcattttttgtcacaccagaaaaacagccagttggctttcagaaaaa
atgtccaaagatgggcattcagtggctgtactatctggagagctaacagttgaacaaaga
atagcagtacttgaccgtttcagagggggcctagaaaaagttttaataacaaccaatgta
ctttcacgtggaatagatgttgaacaagtgacacttgtagtgaactttgacatgccaatg
gacatgaacaaaaaagcagattgtgaaacatacttgcacagaattggccgcactggaaga
tttggcaaagctggtatcgctataaatcttattgattcaccacaggctatggatatatgc
cttgatattgaagcacactttggcaaaaagattcagctgctagatattgaagatgcagaa
gaaattgaaaaaattggtgcataa
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