Vanessa cardui (painted lady): 124544197
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Entry
124544197 CDS
T09161
Name
(RefSeq) very low-density lipoprotein receptor-like isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcd04131
]
124544197
Membrane trafficking [BR:
vcd04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
124544197
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
DUF5050
SGL
Vgb_lyase
EGF_3
Motif
Other DBs
NCBI-GeneID:
124544197
NCBI-ProteinID:
XP_046978616
LinkDB
All DBs
Position
1:complement(12376212..12610606)
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AA seq
908 aa
AA seq
DB search
MIVLVGCRRAAPKYCASMWWFIFLCVIYTKTITVFGSNITGAVSGNVCSLKQFQCANKKC
IPITWVCEGENDCGDNSDEDIEECKETRTCTSSEFRCKTGRCVPLSWRCDNEKDCSDGSD
EEPGTCKVEACGPEEFTCRGKRGECVPLTWMCDDNVDCSDGSDEKACNETCRSDEFTCGN
GKCIQHRWVCDGDDDCGDGSDEVKCPAPTCQPHSHFSCADGHCVTARWRCDGDIDCPDGS
DEMGCASTPKITSPCIATEFECRDRMTCVHRAWVCDGDRDCPDGGDEAPEICRGNVTCRL
DQFQCKDHSCIPGALYCNGDKDCPDGSDELNCTRPKPICDKRTEFDCGGGMCIPLSKVCD
KHTDCPNFEDEPTDRCGENECTKNNGGCTQRCIDTPVGHYCDCEKGYKLIDNTTCEDVDE
CLDPGACSQICINEKGTFKCECHAGYARDPRDRTRCKATEGHPSLLFARRFDIRKISLDH
HEMVAIVNDTKSATALDYVFRTGMIFWSDVTDEKIYKAPIDEGSQRTVVIGDQLITSDGL
AVDWIYNHLYWTDTGKNHIELSDLQGNMRKVLIIDKLEEPRAIALNPLDGWMYWTDWGQV
PKIERAGMDGSHRQTIVAYDVKWPNGLTLDLVRKRVYWVDAKLNTISSCNFDGTARRVIL
YSTDVLRHPFSITTFEDWVYWTDWDKTAVYRANKFNGKDVEAITSTHTLQNPMVIHVYHP
YRQPDGVNHCAAVNGHCSHLCLPAPRIGANSPKVSCACPNGLRLLPDNQMCVEDNTINPE
PEVHKSANDSKKSVVIEDIHIPSVPETPKAGTGISSSGRDASVVAGVVVAVISGIIILAA
LIAVVMYRHYVHRNVTSMNFDNPVYRKTTENQFSLEQNGYAPGSKLYPSTVGEEAQEPLN
TPGTNEFV
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgatagttttggtgggctgtcgacgggcagcccccaaatattgtgcgagtatgtggtgg
tttatatttttatgtgtgatctacactaaaactataactgtgttcggttctaatatcact
ggagcagtatctggaaatgtttgttcgctgaagcagttccaatgcgccaacaagaaatgt
ataccgataacttgggtctgtgaaggggaaaacgattgcggcgacaactcggatgaagat
atagaggagtgtaaagagacacgaacctgcacgtcgtccgaatttcgatgcaaaactgga
cgatgcgtgccgctgtcttggcgttgcgataatgaaaaggactgctccgacggttctgac
gaggaacccggcacttgtaaagtggaggcgtgcggtcctgaagagttcacgtgcagggga
aaacgaggggaatgcgtgcctctcacgtggatgtgtgacgacaatgtcgattgctccgat
gggtccgatgaaaaagcatgcaatgagacgtgccgatcagatgaatttacttgtggaaat
ggaaaatgcatacagcaccggtgggtctgtgatggtgatgatgactgtggtgatggtagc
gatgaagtaaaatgcccagcaccaacttgccaacctcatagtcacttctcgtgcgctgac
ggacattgtgtgaccgctagatggcggtgtgatggtgacatagactgtcccgatggaagt
gatgaaatgggttgcgcttcgacgcctaaaattacgtcaccgtgcatagccacagagttc
gagtgtcgcgatcgtatgacctgcgtacatagagcctgggtctgtgatggagaccgcgac
tgtccggacggcggtgacgaggctccagaaatatgtcgagggaacgtcacctgcagactc
gatcagttccaatgcaaggaccacagctgtattcctggcgcactctattgcaacggcgat
aaagattgccccgacggcagtgatgagctcaattgcacacgacctaagccaatatgtgac
aagcgcacagaattcgactgcggtggtggaatgtgcattcccctgtcgaaggtttgcgac
aaacacacagactgtccgaattttgaggatgaacctactgaccgatgcggagaaaatgaa
tgcaccaagaataatggcggatgcactcaacggtgcatcgatactcccgttggacactac
tgtgattgcgagaaaggatataagctcatcgacaacacaacttgtgaagatgtggacgag
tgcttagatccgggagcatgctcgcagatatgcataaacgaaaaaggtacattcaaatgt
gaatgccatgctggttacgcaagggaccctcgtgatagaactcgctgcaaggcgaccgaa
ggccatccatctcttctcttcgcaagacgcttcgacatcagaaagattagtcttgaccac
cacgaaatggtagccatcgttaatgacacgaagtcggctacagcacttgactacgttttc
agaacaggcatgatattctggagtgatgtcaccgatgaaaagatatataaggcgcccata
gatgaaggtagtcagcggacagtcgtcataggagaccagctgatcacatcggatggactc
gcggtcgactggatctacaaccatctgtactggacagacaccggcaaaaaccacatagag
ctatctgacctgcagggcaatatgaggaaagtgctcattatagacaagcttgaagagcca
agagcgatagccctgaaccctctcgacggatggatgtactggaccgattggggccaggtt
ccgaaaatcgagcgcgctggtatggacggatcccacagacaaaccatagttgcgtacgac
gtgaaatggcccaacggcctcactttagatcttgtacgcaaacgcgtttattgggttgat
gccaaattgaacacaatttcgtcttgtaacttcgacggtacggcgcgacgagtgatcctg
tactcgacggatgtgcttcggcatccgttctcgatcaccacattcgaagactgggtgtat
tggaccgactgggacaagacggccgtgtaccgcgccaacaagttcaacggaaaagatgtc
gaagctataacatccacacatacgctacaaaatccaatggtgattcacgtgtaccacccc
taccgtcaacccgatggtgtcaaccactgcgctgctgtcaacggtcactgttcccacctg
tgcctgcctgcgccccggataggcgccaattccccgaaagtctcctgcgcctgtcccaac
ggtctgagactcctacctgacaaccagatgtgcgtcgaagacaatacaataaatccagag
ccggaggtgcataaatctgctaatgattcaaagaaatctgtagtaattgaggatatacat
atacccagtgttcctgaaacaccaaaagctggtacaggaatctcgagcagtggacgagac
gcgagcgttgttgccggagtcgttgttgcagtaatatcgggaattattatacttgctgct
ttgatcgcggttgtaatgtaccggcattacgtacaccgcaatgtaacatcgatgaacttc
gacaaccccgtataccgcaaaacaaccgaaaatcagttctccctggaacagaatgggtac
gcacctggcagcaagctataccccagtaccgtcggcgaggaggcccaggaacccctcaac
acgcctggtacaaatgagtttgtatag
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