Vanessa cardui (painted lady): 124544403
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Entry
124544403 CDS
T09161
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd04150
mTOR signaling pathway
vcd04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
124544403
04150 mTOR signaling pathway
124544403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcd04131
]
124544403
Membrane trafficking [BR:
vcd04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
124544403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
SGL
Ldl_recept_a
EGF_LRP2
DUF5050
SBBP
cEGF
Lactonase
TEN_NHL
Motif
Other DBs
NCBI-GeneID:
124544403
NCBI-ProteinID:
XP_046978891
LinkDB
All DBs
Position
4:13372161..13391971
Genome browser
AA seq
1507 aa
AA seq
DB search
MTKRRRIVQADKIIQNVINVFCLLMFLQLKGYYSSISNPVLLYTTASDIRVTNTSKLSKI
NAIIKGLEQGSAVDFLYRKNLVCWSDQTAELIQCMEYNNTHSGEKMRLVSKGLITPTGIA
IDWYTEKIYWTDGETNRIEVISIDQKYRKVLFWTDVDLARAIAVVPKEGLMFWTDCGEIP
KIERAGMNGDPATRKVIVKDDIFWPNGITVDYNNNLIYWVDSKLQFFDVMDFNGNNRKKV
IREGLKYPYALTFFNDRLFWIDWKTLVINTLDLTTNGAIKELIKSDSVPVDIKVFDNSRQ
LMPSGDYPCKTNEDCSHLCLLSPNPPGYVCACPTGVKLKEGSNTTCYDGPQSFLLVAQRS
VISRISLDTPDFTPFTLPLKDLKRALTIDFDPKTEYIYWADSLSKTISRARLDGSDQSAV
VRSGGVPESIAIDVLARNLYWTDPVADTISVARLDGSATKVLIHDELYNPRAIALHPTAG
WMFWSDWNEKKPKIERANLDGTNRILLISEKLTWPNGIALDTVNNKLYWGDGRTHKIEVC
DMDGSNRRELLCSYSDILHIFGLTLLGEHLYWTDMQRRTLDMINKDTGLERQPVVEQMAN
MMGVKAFRLGEPLGHNPCVDNNGGCSYLCFNRPNDYVCSCPLGLELASDRKTCIEPEAFL
VYSRKNVIGLISIENENNDAVLPIRELKEVSALAVHVSGSKIYWSDSKTKTINRCSINGS
DVEKILEWMGLVEGLAIDWSGQNIYWTDSATQRIEVARLDGSSRRTLIWQGLKKPKSIVL
DPRKGYMYWSELGSRSIRRAGMDGGGAALQVEAAGRAHALALDRGARALYWAALDPPALE
RAPLDGSARRVLAADVPMPYALALYDDRVYWGDWNTGLIESAKKLNGTDRKTIHTQLDYI
SDLKVYHRARDSLPNQCGVDNGGCTHLCLPLPGADYRCACPTHYRLNRDNLTCAEPEEFL
LFAQKNAVGRILVANGECNDAFIPLTGLKSVRAIEYDPIDRYLYWMDDESHSIRRVPISY
STTSAITDSTTVVTGLSRPFHMALDVLGRALYWTCLDTDSINVTSIDNNSSVGVIVRGDK
MMPRHLAFHQTKRVLIWSDAGLGAIMRASVDGTARSELARVSNVTALAVEQSSATVYWAV
ARQIHAIDLDSVGSKRVVWQGGWVGALAAYGGSLYLCGSERAPMRLPLHRRDAPAAPLPH
LARIVAVAPVQRVAREHPCYGGRACGGAPGACGAGGACGCGLHCAARRACAPDHFLCDSP
DAHCVPMEWKCDGQRDCPDGSDEARCDACAGLRCADGSCAAALGACATGAYCAHKPLPDA
FRCDERLCLAPRLLCDGRAHCEDGADEAPAACGYVHKGQVVARGGGQSHALLACGVVAGA
GVALAGAWAALRRVRRARRQPPPPRAFALVKPVPARARSDRTSEELSATGSGSCSGSASD
SLCGRYPRPTANPPPSPATAGGRRRAYRHYRACNRPPPPTPASTDANESEPEPAARAPPP
SPAPLLY
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagcgccgaagaatagttcaagctgacaaaataatacaaaatgttataaatgta
ttttgtttattaatgtttttacaattgaagggttattactcgagcataagtaatccagtg
ttattatatacgacggcttccgatattcgagtaacgaatacttcaaagttaagtaaaatc
aatgcaataattaaaggcttagaacaaggctctgctgtcgattttctgtatagaaagaac
ttagtgtgctggtctgatcagacggcggaattgatacaatgtatggaatacaacaacaca
cattctggagagaaaatgaggcttgtatcaaaaggcttaattactccaacgggtatagca
attgactggtacacagaaaaaatatattggacagacggtgaaactaatagaatagaagta
attagtatagaccaaaagtacagaaaagtattgttctggacagatgtagacctcgctaga
gctattgctgtagtacctaaggaaggattaatgttctggactgattgtggtgaaatacca
aaaattgaaagagcaggaatgaacggtgatccagcaacacgaaaagttatagtaaaagat
gatattttctggccaaatggtataacagttgactataataacaatctgatatactgggta
gattcaaagttacaattctttgatgttatggacttcaatggaaataatagaaaaaaagtc
ataagagagggattgaaatatccatatgctttaacatttttcaatgacaggttattttgg
attgattggaaaactctagttataaatacattggatcttacaacaaatggtgctataaag
gaactaatcaaatcagattccgttcctgttgatattaaggtatttgacaacagcagacaa
ttgatgcccagcggagattatccttgtaaaacaaatgaggattgttcacatttgtgcctt
ttatcacctaatccaccaggatatgtgtgtgcgtgcccaactggcgtaaaactaaaggag
ggtagcaatacaacctgctatgatggtccacagtcatttctactagtagctcaaagatct
gtcatatcaaggatatcacttgacacaccagacttcacgccctttactctacctctgaag
gacttaaagagagctctcactattgactttgatcccaaaactgaatatatatactgggca
gacagtttgtccaagacgatatcgcgcgcgcgactggacggcagcgaccaaagcgctgtg
gtgcgcagcggcggcgtgcccgagagcatcgcaatcgacgtgctggcgcgcaacctgtac
tggaccgaccccgtcgccgacaccatcagcgtcgcgcgcctcgacggcagcgccaccaag
gttctaatccacgatgagctatacaacccgcgagccatcgcgctgcacccgacagctggc
tggatgttttggtccgactggaacgagaagaaacccaagatcgaacgtgccaatttggat
ggaaccaacagaattttgctgatatcagagaaacttacctggcctaatggaattgcttta
gatactgtgaataataaattgtattggggtgatggaagaactcacaaaattgaggtttgc
gatatggatgggtcgaatagacgagaacttttatgtagttacagtgatattttacacatt
ttcggattgacactacttggcgagcatctctattggacagacatgcaaagacgaacactg
gacatgatcaacaaagacacgggattagagagacagcctgttgtggagcaaatggctaat
atgatgggtgtcaaggcatttcgtttgggagaacccctcggacataatccatgcgtagac
aataatggaggatgctcatatctctgctttaacagacctaatgactatgtgtgtagctgt
cctctaggtttggaacttgctagtgatcgaaaaacatgcatcgaaccagaagcatttctc
gtatacagcagaaaaaacgtaatcggtctgatcagtattgaaaatgagaacaacgacgct
gtgctcccgatacgagagttgaaagaagtcagtgctttagctgttcacgtgtcagggtcg
aagatatactggtctgacagcaaaaccaaaacaataaatcgctgctctataaatggatcg
gatgtagagaaaatactggaatggatgggcttagttgaaggcttagcgattgattggtct
ggtcagaacatctactggaccgactcagcaacacagcggatagaagtagcgaggttagac
ggctcgagtagacgtactctcatctggcagggtctcaagaaacctaagagcatcgtgctc
gaccctcgcaaggggtacatgtactggtcggagctgggctcgcgcagcatccggcgcgcg
ggcatggacggcggcggcgcggcgctgcaggtggaggcggcggggcgcgcgcacgcgctg
gcgctggaccgcggcgcgcgcgcgctctactgggccgcgctcgacccgcccgcgctcgag
cgcgcgccgctcgacggctcggcgcgccgcgtgctcgccgccgacgtgcccatgccctac
gcgctcgcgctctacgacgaccgcgtctactggggcgactggaacaccggattaatagag
tctgcgaagaaattgaacggcacggacaggaagacgatccacacgcagctggactacata
tcggacctgaaggtgtaccaccgcgcgcgcgactcgctgcccaaccagtgcggcgtggac
aacggcggctgcacgcacctctgcctgccgctgcccggcgccgactaccgctgcgcctgc
cccacgcactaccgcctcaaccgcgacaacctcacctgcgccgaacccgaagagtttctg
ttgttcgcacaaaaaaacgccgtggggcgaattctagtcgcaaacggagagtgcaacgac
gcattcatacccctcaccggtctcaaaagcgtgcgagccatagagtatgaccctatcgac
agatatctttactggatggacgacgagtcgcattcaatccgacgagtacccatctcgtac
tcgaccacatcagcgataacggactccacgacggtcgtcacaggcctgtcgagaccgttt
cacatggccctggacgtgttggggcgagccttgtactggacctgtctggatacggactcg
atcaatgtaacttcgatcgacaacaattcctcggtcggcgtcatagtgagaggcgataaa
atgatgccgagacacctggccttccatcagaccaaaagagtattgatctggagcgacgcg
gggctgggcgccatcatgcgcgccagcgtagacggtactgcacgcagcgagctggcgcgc
gtgtccaacgtcaccgcgctggccgtggagcagtcctccgccaccgtgtactgggccgtg
gcgcgccagatacacgccatcgacctcgactccgtcggcagcaaacgcgtggtgtggcaa
ggcggctgggtgggcgcgctggcggcgtacggcggctcgctgtacctgtgcggcagcgag
cgggcgcccatgcggctgccgctgcaccggcgagacgcgcccgccgcgccgctgccgcac
ctggcgcgcatcgtggccgtggcgcccgtgcagcgcgtggctcgcgagcacccgtgctac
ggcgggcgcgcgtgcggcggcgcgccgggcgcgtgcggcgcgggcggcgcgtgcggctgc
gggctgcactgcgccgcgcgccgcgcctgcgcgcccgaccacttcctgtgcgactcgccc
gacgcgcactgcgtcccgatggagtggaaatgtgacggacaacgcgactgccccgacggg
tcggacgaggctcgctgcgacgcctgtgccggcctgcgctgcgcggacggctcgtgtgcc
gccgctctcggcgcctgtgccaccggtgcctactgcgcgcacaaaccactgcccgacgcg
ttcagatgcgacgaacgcctgtgcctggcgccgcgactgctgtgcgacgggcgcgcgcac
tgcgaggacggcgcggacgaggcgcccgccgcctgcgggtacgtgcacaagggccaggtg
gtggcgcgcggcggcgggcagtcgcacgcgctgctggcgtgcggcgtggtggcgggcgcg
ggcgtggcgctggcgggcgcgtgggcggcgctgcggcgcgtgcggcgcgcccgccgccag
ccgccgccgccgcgcgccttcgcgctcgtcaagcccgtgccggcccgcgcgcgctccgac
cgcacctccgaagaactgagtgcgacaggctccggctcgtgttcgggctcggcgtcggac
agcctgtgcgggcgctacccccgccccaccgccaaccccccgccgagccccgccacggcg
ggcgggcggcggcgcgcgtaccgccactaccgcgcgtgcaaccggccgccgccgcccacg
cccgcctccacggacgccaacgagtcggagcccgagcccgccgcgcgcgcgcccccgccc
tcgcccgcgccgctgctctactga
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