Vanessa cardui (painted lady): 124544465
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Entry
124544465 CDS
T09161
Name
(RefSeq) intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vcd03037
]
124544465
Cilium and associated proteins [BR:
vcd03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
124544465
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_12
TPR_6
TPR_2
TPR_7
TPR_19
TPR_11
TPR_16
TPR_10
TPR_14
ANAPC3
RNPP_C
ARM_TT21
ARM_TT21_4th
RPN7
INSC_LBD
VWA_4
Motif
Other DBs
NCBI-GeneID:
124544465
NCBI-ProteinID:
XP_046978987
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All DBs
Position
4:6418867..6430393
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AA seq
837 aa
AA seq
DB search
MLGSRYSASRPGLDKPPRTAVVIDDEDELYTGFNDVSPALDTRSLREDQAFQQTIRTPGI
GRQMTSRMGTGVFRLGTVSMRGGSRAGTASARPVTAVRAAGYTSTRDAPVRDDKKEDSIE
DKIRQMEAKIMTLVEESCVLSARPNSEDETDTQREQNMSQALAKAQEASTLERQLIRIQE
QANLGDSHNLDLTFAVLCNLADQYALNEMYTEALNTYQLLTRNKVFPHANRLKVNMGNIY
FKMGEHPKALKLYRMALDQTPTAEKDLRMKVMHNIGLLLVRMGKFRDAVTNFQHIMHEQG
DFQTGLHLVLCSVALDDAEGGKAAFHAMLDVEPPTYHHDIAIDDENDAYECVVRDVVRGD
RLSRWSRVAAAHAERCLALAAAALMRPLARTHRDDDSGSASWCVEALRGYSGGGAGSRLE
LGSALAALRSAAGATGSSGSGSTGAIAAGTRALQRLKAVARAHPNDRVLRAEANTDAAFV
AYALGKFSEAHALSEAASRDDPYSCAARVCSVLSGLAAARLASPASPASPSASSDSSAAR
AAATNLVAATHLDPTDLIAMHNSALALELSEEVEGAQARWQRVRNSTDAGATLRALAAAG
LARTARAHAEHGDLAAEHWYSIIGNWDVGVSCALAELHSEMGDTQTAKHHYQDVEAAWAS
TAALRWLAADAAPEPALRLARRAARLQPANPEWGLLMGSCLRASGRYQEALAVYKKLNAR
FPDNIQCLKLIVKLCGDQGLAETSAWSRELQRRKQQERVPLASADSASSRASQSPVLQTQ
LQGAARAEGGAARRARANINESYGQESMQPLTRSLTRTDSKKKTLEDFDDDLPLPPE
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgttaggatcaagatacagtgcgtcgaggcctggcctcgacaaaccgccgcgtacggct
gtggtgatcgacgacgaagatgagttgtacacaggattcaacgacgtatctccagcattg
gacacgcgaagtcttcgtgaagatcaagcatttcaacaaacgataagaactcctggaatc
ggccggcagatgacaagtcgaatgggcactggggtgttccggctgggcacggtgagcatg
cggggcggctcccgcgcgggcacggcttcggcgcggcccgtcaccgccgtgcgcgccgcc
ggatacacgtccacgcgagacgctcccgtcagggacgacaaaaaggaggatagcattgaa
gataaaataaggcaaatggaagctaaaataatgactttggtagaggagtcgtgtgtgcta
agcgcgcgtcccaactctgaagacgaaactgacactcaaagagaacaaaatatgagtcag
gcattagccaaagctcaagaggcatctacactcgaaagacagttgatacgaatacaggaa
caagccaaccttggcgattctcataatttagatttaactttcgctgtgctctgtaattta
gccgaccaatatgctctaaacgaaatgtacacagaagctctcaacacctatcaacttctc
accaggaataaggtgtttccacacgcgaacagactaaaggtaaatatgggaaatatatac
ttcaaaatgggcgaacaccctaaggcgctgaaactttacagaatggctctcgatcaaacg
cctacagcagaaaaagatctaagaatgaaagtgatgcacaatataggattactactggtg
cgaatgggcaagtttcgtgatgctgtaaccaattttcaacatataatgcatgaacagggt
gattttcaaacaggcttacatctcgtattatgttcggtggcactagatgacgccgaaggt
ggcaaggcggcgtttcatgcaatgctcgacgttgagccgcccacttatcaccatgatatt
gctatcgacgatgagaacgacgcgtacgagtgcgtggtccgcgacgtggtgcgcggcgac
cggctgtcgcggtggtcgcgcgtggccgccgcgcacgccgagcgctgcctcgcgctggcc
gccgccgcgctcatgcgcccgctcgcacgcacgcaccgcgatgacgactctggaagcgcc
tcatggtgtgtggaagctttacgcggctattccggcggaggcgccggttctcgcttagaa
ctgggcagtgccttggcagcactgaggagcgccgccggagctactggaagtagtggttcc
ggttcgacgggtgcgatagcggccgggacgcgcgcattgcaacgattgaaagctgtcgcc
cgtgcacatcccaacgaccgagttctacgcgccgaagccaacaccgatgcggcgttcgtt
gcctatgcgctgggcaaattttctgaggcgcacgcgctaagtgaggcggcctcccgcgac
gacccgtacagctgcgcggcgcgcgtgtgcagcgtgctgtcggggctggcggcggcccgc
ctcgcctcgcccgcctcgcccgcctcgccctccgcctcgagcgactcgagcgccgcgcgc
gcggccgccaccaacctcgtcgctgctactcatcttgatcccactgacttgatagctatg
cacaattcggcccttgcgcttgagctgtccgaggaggtggagggcgcgcaggcgcgctgg
cagcgcgtgcgcaactccacggacgcgggcgccacgctgcgcgcgctggccgccgccggc
ctggcgcgcaccgcccgcgcgcacgccgagcacggggacctggccgccgagcactggtac
agtataatagggaactgggacgtcggcgtgtcctgtgcgttggccgaactgcacagcgag
atgggggacacgcaaactgctaaacatcattaccaagatgtggaggcggcgtgggcgagc
acggcggcgctgcgctggctggcggcggacgcggcgcccgagcccgcgctgcgcctggcg
cgccgcgccgcgcgcctgcagcccgccaacccagaatggggtcttctaatgggcagctgt
ctacgcgccagcgggcgttatcaggaggctcttgccgtgtataagaaactgaacgctagg
tttccggacaatattcaatgcttgaagttaattgtgaagctgtgcggagaccaggggttg
gccgagacaagcgcctggagccgggagctgcagcgacgcaaacaacaagagagagtgccc
ctggcgtcggcggacagtgcctcgtcacgggcgagccagtcgcctgttctgcagacacag
cttcaaggagcagcgcgggcggagggcggcgccgcgcggcgcgcgcgcgctaatataaac
gaatcgtacggtcaggagagcatgcagccgctgacacggtccctcactcgtaccgacagc
aagaagaaaactctggaagattttgatgacgaccttcctctaccccccgagtga
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