Vanessa cardui (painted lady): 124544525
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Entry
124544525 CDS
T09161
Name
(RefSeq) gamma-aminobutyric acid receptor alpha-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd04080
Neuroactive ligand-receptor interaction
vcd04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124544525
04082 Neuroactive ligand signaling
124544525
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vcd04040
]
124544525
Ion channels [BR:
vcd04040
]
Ligand-gated channels
GABA-A
124544525
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
124544525
NCBI-ProteinID:
XP_046979079
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All DBs
Position
4:6027995..6055233
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AA seq
564 aa
AA seq
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MVYENLLITVIVLLMGDEALAKGAIYLTTKNGTFPITLTSFKSHDSSTSGDTPKILSAIA
NNLSRENVDGHWDKSSGVLFSSYLNDTNDKNNANLWKTKRSINDAVSKNITLVLENLLKN
YENSQLPTHGKGYPTVVQTNILIRSMGPVSELDMDYSMDCYFRQYWRDTRLSFLGPIRSL
SLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQHGDILYSMRLTIKAKCPMELR
NFPMDRQSCPLILGSYAYSNQQLVYQWQNSQSVNFVPGMTLSQFDLISFPYRNFTFTRRE
GDFSVLQVSFNLQRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVGLGITTVLTLS
TISLDSRTDLPKVRYATALDWFLLMSFFYCIATLLEFAGVHYFTKVGSGEIVIDDSEWED
LIEEVGGDAFAARQLAVRRRSSVRSGTNFSFSTANENHDETDLTQKPEQTAVRLTMERTT
QTEVRVPRWRQLLYCLAGDDQYRRQRQREAGNRGHINSVSHIDKAARVLFPASFALLNFF
YWMIYALSNDTFAWSDNPINTLSH
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggtctacgaaaatttactcataactgtcatcgtacttcttatgggcgacgaagcgctc
gcaaaaggagcaatttatttgacgacaaaaaatggaacatttccaataacgctgacatcc
ttcaagtcccatgacagtagtacatcgggtgacactccgaagattttatctgcaattgct
aacaatctatcaagagagaacgtagatggccactgggacaaaagctctggcgtattattt
tcaagttatctcaacgataccaacgacaaaaataacgctaacttatggaaaacaaagaga
agcataaacgacgcagtgtcgaaaaacatcacattagtcttggaaaacctcttaaagaac
tacgagaattcgcaactacctactcacggtaaaggttatcctacagttgtacaaacaaat
atattaattaggagtatgggtccagtctctgaactagatatggattattcaatggactgc
tacttcaggcaatactggagggacactcgactgtcattcttgggcccaattcgctcctta
tccctttcaattaaaatgttagaaagaatatggcgaccggatacttacttttataacgga
aagcattcatacgttcacactattaccgtacccaataagttactaaggattagtcaacac
ggcgatattctttactctatgcggttaacgattaaagcgaaatgtccgatggagcttcgt
aatttcccgatggatcggcaatcgtgtccgctcatcctcggcagctatgcgtactcaaac
cagcaactagtatatcagtggcagaattcgcagagcgttaatttcgtgccaggcatgact
ttatctcagttcgacctcatcagcttcccatacagaaatttcacctttaccagacgagaa
ggggacttctcggtgctccaagtgtcgttcaatcttcagcggcacacaggatatttcctc
atccaagtgtacgtgccctgtatcttgattgtggtactctcttgggtgtctttttggata
catcgtgaggcaacgtcagatcgagttgggctcgggattacaacggttttgactctatcg
acaataagtctggattcgcgcacagatctccctaaagtgcgatacgctaccgcccttgat
tggttcctgcttatgagttttttctattgcatcgctactctgcttgagtttgctggtgta
cattattttacaaaggtaggatcgggggaaattgtgatagatgactcagaatgggaggat
ttaatagaagaagttggtggagacgcttttgcagctcggcaactagcagtacgtcgacgc
agctctgttagatcgggaaccaatttcagtttttccacggccaatgaaaatcacgatgaa
acagatttaacacaaaaaccggagcaaaccgccgtccgtttgaccatggagcgcaccacg
cagactgaagtcagggtgccgcgctggagacagctgctatactgccttgcgggagacgat
cagtaccgccgtcagagacagagggaggctggtaatcgcggtcacatcaatagcgtgtcg
cacatagacaaggctgcgcgcgtcttgttcccggcatcattcgctcttctaaacttcttc
tattggatgatttatgctttatccaatgatacctttgcttggagcgacaaccctatcaat
actctgtcacactaa
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