Vanessa cardui (painted lady): 124544530
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Entry
124544530 CDS
T09161
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-like isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd04080
Neuroactive ligand-receptor interaction
vcd04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124544530
04082 Neuroactive ligand signaling
124544530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vcd04040
]
124544530
Ion channels [BR:
vcd04040
]
Ligand-gated channels
GABA-A
124544530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
124544530
NCBI-ProteinID:
XP_046979083
LinkDB
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Position
4:complement(6018017..6025747)
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AA seq
493 aa
AA seq
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MSVSRQPLARSARLHARQILLLMFILPLFFALVKAQPERTVAVDRLENVTHTVTRILDGY
DIRLRPNFGGDPLYVGMDLTIASFDAISEVNMDYTITLYLNQYWKDERLAFGLQDEVLTL
SGDFADKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGSVTYGMRFTATLACMMDLHYY
PLDSQNCTVEIESYGYTVSDVVMYWKETPVRGVEDAELPQFTILGHETNDRKEKLATGIY
QRLSLSFKLRRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTIS
TGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGARARKRAKLKNRDQISS
STSMDKELKSGEGSHSPEEIIALREYTTTAGRVSPLPSLRSRPLPPTTGAPPSLRLQRDY
TNLRYRTRPHSKNSRNNPNKPKMIHALKRGATVIKASMPKIRDVNVIDTYSRVIFPICFL
IFNGVYWVFYIFD
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgagtcgccaaccgctagcgcgttcagctcgcctgcacgcgcgccagatactc
ctgcttatgttcattctcccgctattttttgctttagtaaaagcacaaccagagcgcacc
gtagcggttgatcgtttggagaacgtcactcacacggttacacggattctcgacggctac
gacatacgtctacgtcctaactttggcggcgacccgctttacgtcggcatggatttaacc
attgctagtttcgacgcaatatccgaagttaatatggactacacaataaccctttattta
aatcaatattggaaggatgaaaggctcgctttcggtttacaagacgaggtcctaacctta
tctggagactttgctgataaaatttgggtaccggacaccttctttgcaaacgacaagaat
agttttctccacgatgtgacggaacgcaacaagctggttcgtctcggcggggacggcagc
gtgacctacggcatgcgtttcacggccacgctcgcctgcatgatggacttgcactactac
ccccttgacagccagaactgcaccgtcgagattgaaagctatggctacacggtgtcggac
gtggtgatgtactggaaagaaacacctgtaaggggagtcgaagatgcagaactccctcag
ttcactatactaggacatgaaactaatgacagaaaggagaagttagctactggcatctat
caacggttatctcttagtttcaagcttcgcaggaacattggatattttgtgtttcaaacc
tacctcccgagcattctgattgtaatgctatcttgggtatccttctggatcaatcacgag
gctacttcagcgagagttgcattaggtatcactactgtccttacgatgactacgataagc
acaggtgttaggagcagtttgccgcgcatatcctatgtgaaagcgattgacatttacctt
gtcatgtgctttgttttcgtattcgcggcgctcctggaatatgccgcagtaaactatacc
tactggggcgcaagggcaagaaagcgagccaagttaaaaaaccgcgaccaaatttccagt
agcactagtatggataaggaactaaaatctggcgaaggttcccactctcctgaagaaatc
atagctcttcgcgagtacacaactaccgctggacgagtgtcgccgttgccaagcttgcgg
tcacgaccactgccaccgaccaccggcgcaccgccgtctctgcgactccagagagattat
acgaacctacgctacaggacacgacctcattcgaagaattcaagaaataaccctaacaag
ccaaagatgatacacgctctgaaacgtggcgctaccgtcataaaggcttcgatgcccaaa
atacgtgatgttaacgtcatagacacgtattcacgcgtcatttttccaatatgcttcctt
atatttaacggtgtctattgggttttctatatatttgattag
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