Vibrio cholerae O1 2010EL-1786: Vch1786_I0055
Help
Entry
Vch1786_I0055 CDS
T01650
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vce
Vibrio cholerae O1 2010EL-1786
Brite
KEGG Orthology (KO) [BR:
vce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vce03016
]
Vch1786_I0055 (truB)
Enzymes [BR:
vce01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Vch1786_I0055 (truB)
Transfer RNA biogenesis [BR:
vce03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Vch1786_I0055 (truB)
Prokaryotic type
Vch1786_I0055 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AET25670
LinkDB
All DBs
Position
1:68199..69137
Genome browser
AA seq
312 aa
AA seq
DB search
MARRRKGRVIHGVILLDKPTGISSNDALQKVKRLYGAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTDTSDSDGQVVQTRPVHVDYDTLLACIAKFRGETDQ
VPSMFSALKYQGRPLYEYARQGIEVPREARKITVYEIELHRFEGDEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRVGVANYPYERMVTLEQLNALVEQAHRDEKAVADVLDPLL
LPMDTAVEALPEVNVIPELMTLIQHGQAVQVSGAPSDGMVRITGGEQKLFLGVGEIDDNG
KVAPKRLVVYGE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgacgtaaaggtcgggttatccacggtgtgattctgttggataagccgaca
ggtatctcttccaacgacgctttgcaaaaggttaaacgcctctatggcgctgaaaaagcg
ggacatactggcgcgcttgatcctctggcgacgggcatgttgccaatctgcctcggtgaa
gccactaagttttcccaatttctgctcgattctgataaacgttatcgtgtgatcgccaaa
ttgggtgaacgtaccgacacctcagattctgatggtcaagtggtacaaacgcgtcctgtt
cacgtggattacgatacgctgctggcctgtatcgccaagtttcgcggtgaaacggatcaa
gttccatccatgttttcagcgttgaaataccaaggtcgtccactctacgaatacgcccgt
cagggtattgaagtgccgcgtgaagcgcgcaagatcactgtgtatgagattgagctgcat
cgctttgaaggtgatgaagtggagatggaagtacactgctcgaaaggcacttatattcgt
accatagtcgatgatctgggtgaaatgctgggctgtggagcgcatgtgaccatgctgcgc
cgtgtgggtgtcgctaactatccgtatgagcgaatggtgacgctagagcaactcaacgct
ttggttgaacaagcccatcgtgacgaaaaagcggtggcggacgttctcgatccgctatta
ctgccgatggatactgccgtggaagctttacccgaagtcaacgtgatcccagaactgatg
acacttattcagcatgggcaagcagtacaggtttcgggggcaccatccgacggtatggtg
cgcattactggcggcgagcagaagctattccttggcgttggcgagattgacgataacggt
aaggtcgcgccgaaacgcttggtggtgtacggcgaataa
DBGET
integrated database retrieval system
