Vibrio cholerae O1 2010EL-1786: Vch1786_I0794
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Entry
Vch1786_I0794 CDS
T01650
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vce
Vibrio cholerae O1 2010EL-1786
Pathway
vce03030
DNA replication
vce03430
Mismatch repair
vce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Vch1786_I0794
03430 Mismatch repair
Vch1786_I0794
03440 Homologous recombination
Vch1786_I0794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vce03032
]
Vch1786_I0794
03400 DNA repair and recombination proteins [BR:
vce03400
]
Vch1786_I0794
Enzymes [BR:
vce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Vch1786_I0794
DNA replication proteins [BR:
vce03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Vch1786_I0794
DNA repair and recombination proteins [BR:
vce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Vch1786_I0794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
CAF1
Motif
Other DBs
NCBI-ProteinID:
AET26398
LinkDB
All DBs
Position
1:complement(845627..846328)
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AA seq
233 aa
AA seq
DB search
MFDSAIYWPARFAHLAQQARQTHLQRFYAQPLVEGSTPIHQCSLVALDFETTGLNAEQDA
IVSIGLVPFTTQRIFLSQARYWLVKPSQPLEDESIVFHGITHSELQHAQAPEQVLKELLE
ALHGKIVVVHFRHIERDFLRQISLNIWGEAIEFPVLDTLEIERQLLDKQRSLWQRIARRP
LPSIRLGQSRMRYHLPPYSPHHALTDAIATAELFQAQCAYHLPPHTAIQSLWL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgttcgattctgcgatttactggcccgctcgatttgctcacttagcccagcaggctcgg
caaacccatttacagcgcttttatgctcaacctctggttgaaggctcaacaccgattcat
cagtgctcactggttgccctcgattttgaaacaacgggactgaatgccgagcaagatgcc
attgtgagtatcggtttagtgccttttactactcaacggatttttcttagtcaagctcgg
tattggttagtaaaaccctctcaaccgcttgaagatgagtcgatagtgttccatgggatc
acgcactccgagttgcagcatgcgcaagctccagaacaggtgttgaaggaattactcgag
gcgctgcacggcaagattgtcgtcgtacactttaggcatattgaacgtgattttttgcgc
cagattagcctgaatatatggggcgaggcgatcgagtttcccgtgttggatacattagaa
attgaacgtcagttactggataagcaacgctcgctgtggcaacggattgcacgtcgacct
ttaccctcaatacgccttgggcaatcacggatgcgttatcacttaccgccctactcacct
caccatgcgctgacggatgccattgcgaccgcagaactttttcaagcgcagtgcgcgtac
catctcccaccccacaccgctattcagtctttgtggctttag
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