Vibrio cholerae O1 2010EL-1786: Vch1786_I0892
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Entry
Vch1786_I0892 CDS
T01650
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vce
Vibrio cholerae O1 2010EL-1786
Brite
KEGG Orthology (KO) [BR:
vce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vce03400
]
Vch1786_I0892
Enzymes [BR:
vce01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Vch1786_I0892
DNA repair and recombination proteins [BR:
vce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Vch1786_I0892
Prokaryotic type
Vch1786_I0892
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AET26496
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All DBs
Position
1:960158..961672
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AA seq
504 aa
AA seq
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MEKINLVWLKRDLRLTDHAPLQAALTSGRPTLLLYLFEPMLLGDAHYSERHWRFVWQSLQ
AINRDLAQSKGEVLIVTSDWQTCFARIAERYAIEAIYSHQEVGLACTFQRDLALAQWCQQ
HDIVWHEFPYAAVIRGAQTRKNWDEHWQQVMRSPCCDPDLTRANWLKLDAATLGLRSDIP
ATWQSKQAGMQTGGSDMAWATLEDFFARRGREYYRSISSPSLARHACSRMSPYLAWGNIS
LREMYQTLLKHWSVAGFRRSLIALSSRLHWHCHFIQKFESECEMEFRCVNRAYDSLLQQS
SDAPAAQLAAWQTGHTGIPLVDACMRCLIQTGYLNFRMRAMLVSVLTHHMNVDWRAGVTY
LAQLFLDFEPGIHYPQFQMQAGVTGTNTIRIYNPTKQAQEHDSEGQFIHKWVPELAQVPV
PLLFEPWLMTPLEAQMYQVPLESPYLKPVMDLEASAKQARDRLWQWQKLPAVQAEAMRIL
ARHVRQAKPRTSPRQPNKRQPEMD
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagatcaatctggtatggctcaaacgcgacctaaggctgaccgatcacgcgcca
ttacaagcggcgttaacttcggggcgaccgacgttactactctatctgtttgagccaatg
ctgcttggcgatgcgcattacagcgaacgacactggcgctttgtgtggcaatcattgcaa
gccatcaatcgtgatttggcgcagagtaaaggggaggtgttgatcgtcacatccgattgg
caaacctgctttgcacgtattgctgagcgctacgccattgaggcgatttattctcatcaa
gaagtcggtttagcctgcacttttcagcgcgatcttgcgctggcgcagtggtgccagcaa
cacgacatcgtctggcatgagtttccttatgccgccgtgatccgcggcgcgcaaacccgt
aaaaattgggatgagcattggcagcaagtgatgcgctccccttgctgcgatcctgattta
acacgcgccaattggctgaagctggatgccgcaacacttggtttgcgcagcgatatccct
gccacatggcagagtaaacaagcgggcatgcaaactggcggcagtgatatggcgtgggcg
acgctggaggattttttcgcgcgtcgagggcgagagtattaccgctccatttcaagtccg
agcttagcgcgccacgcgtgctcgcggatgtcgccttatcttgcgtgggggaatatctca
ctgcgggagatgtatcaaactttgctcaaacactggtcggtagcgggatttcgccgcagc
ctgattgcgctttcatcacgtctgcattggcactgtcactttatccaaaaatttgaatca
gaatgtgagatggagtttcgctgcgtcaaccgcgcttatgattcactcttacagcaatca
agcgatgcccccgccgcgcagttagcggcttggcaaactgggcacaccggcattccactg
gtcgatgcctgtatgcgttgcttaattcaaaccggatacctcaattttcgcatgcgcgcg
atgttggtgagcgtgttaactcatcatatgaatgtggattggcgagcgggcgtgacttat
ttggcgcaactgttcctcgattttgaaccgggcattcattatccgcagtttcaaatgcaa
gcaggggtcacgggtaccaatactatccgcatttataacccgaccaagcaagcacaagag
catgacagcgaagggcagtttattcacaaatgggtgccagagttggcgcaagtgcctgta
ccgctgctctttgaaccctggctgatgacaccgcttgaagcgcagatgtatcaagtaccg
cttgagagcccttacctcaagccggtgatggatttggaagccagtgccaagcaagcacgg
gatcgcttatggcagtggcagaaactgcctgcggtacaagccgaagcgatgcgtatcctc
gcgcgccatgtgcggcaagctaaaccgagaacttcgccgcgccaacccaacaagcgtcaa
ccggagatggattaa
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