Vibrio cholerae O1 2010EL-1786: Vch1786_I1134
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Entry
Vch1786_I1134 CDS
T01650
Name
(GenBank) helicase-related protein
KO
K19789
DNA repair protein RadD
Organism
vce
Vibrio cholerae O1 2010EL-1786
Brite
KEGG Orthology (KO) [BR:
vce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vce03400
]
Vch1786_I1134
DNA repair and recombination proteins [BR:
vce03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
Vch1786_I1134
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
SLFN-g3_helicase
DZR
AAA_22
AAA
zf-tcix
DUF7577
AAA_16
P-loop_SecA
MgtE_N
Zn_ribbon_3
T1R_D3-like
AAA_30
ERCC3_RAD25_C
FAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
AET26736
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All DBs
Position
1:1233081..1235000
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AA seq
639 aa
AA seq
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MLTSSAGSRLLYRPHTIITQRNCLRPTSNDAKAVNCPDNLGNSQRMYTLRPYQADSVKAV
VHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKELVEQNHAKYEGYGLTG
AIFSAGLGRKETDQQVVFASVQSVVRNLSEFQNQFSLLVIDECHRVPDDKNSSYQKVITH
LLELNPGMKVLGLTATPYRLGMGWIYQYHTRGLVRSEEPRFFRDCIFELPIHYLLDEGFL
TPAQLIDTPVMSYDFSQLKPANTGRYRESELDLVIEQSQRATPQIVAQIIELAKARQGVM
IFAATVRHAEEIYRLLPTEHAALVIGDTPTPERDRIIQAFKQQQIKFLVNVSVLTTGFDA
PHVDLIAILRPTESVSLYQQIVGRGLRLAAGKSDCLVLDYAGNQYDLYQPEVGDPKPDSD
SEIITIPCPACGFNNNFWGKLDANGFLIEHYGRRCQGYFTDDETGEREHCGYRFRAKYCN
ECGADNDIAARICHECDTTLVDPDKKLKEALNLKDALVFECTDMSLKVHKDAKGKSQLQV
TYHGQDAVQVHQFWPLNTPRQKQQFHDQFVRPHLADKHRPFEAATPAKVVDHQHRFRPPL
FVIARKSGRFWTIRDKVFADEFASPTDAHLSNRAYTIPT
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgcttacctcatctgctggaagtcggctattatacagacctcacacaataattacccag
cgcaattgcttgcggccgacatcaaacgatgcaaaagccgtcaattgcccagataacctc
ggtaactcccagcggatgtatacgttacgaccttatcaagccgactcagtgaaagccgtc
gtgcactattttcgccagcactctaccccggccgtgattgtgctcccgaccggcgcagga
aaaagcttagtgatcgcagagcttgcgcgccttgcccgtggccgcgtattggtgttggcc
catgtcaaagagttggttgagcaaaaccacgccaaatatgaaggctatggcttaactggc
gcgattttttccgcaggcttggggcgcaaagaaaccgatcaacaagtggtgtttgcctca
gtgcaatcggtggtgcgcaacttatctgagttccaaaaccagttctctttattggtgatt
gatgagtgccaccgcgtccccgatgacaaaaacagcagttatcaaaaagtgatcacccat
ttgctggaactcaatccgggcatgaaagtgctcggactgaccgcaaccccctatcggctc
gggatgggatggatttaccagtatcacacccgtggtttagtgcgcagtgaagagccgcgt
tttttccgcgactgtatttttgagctacccattcactatttattggatgaaggttttctc
acccccgctcaattgattgatacccctgtcatgagctatgacttttcgcagttgaaacca
gccaatacggggcgctatcgtgaatcagaactcgacttggtgattgagcagtcacaacgc
gccactccgcaaattgttgcccagatcatcgagcttgccaaagcgcgacaaggggtgatg
atttttgcggcgaccgtgcgtcacgccgaagagatctaccgtttactgcctaccgagcac
gctgctttagtgatcggggataccccgacgccagagcgtgatcgcattatccaagcgttc
aaacagcaacagattaagtttttggtcaatgtttccgtactcaccaccggatttgatgcg
ccgcatgtcgatttgattgcgattttaaggccaacggaatcggtcagtctctatcaacaa
attgtcggccgcgggctacgccttgcggcgggcaaatccgactgtttggtgctcgactat
gcgggtaatcagtacgatctgtatcaacctgaagtgggcgatccgaaacccgattcagac
agcgaaatcatcaccattccctgccccgcttgcggttttaacaataacttctggggcaag
ctcgatgcgaacggctttctgattgagcactatggccgccgctgccaaggctatttcacc
gatgatgagacgggtgagcgcgagcattgtggctaccgttttcgtgccaaatactgcaat
gaatgtggtgcggataacgacatcgccgctcgcatctgccatgagtgtgacaccacgtta
gtggaccccgataagaaactcaaagaggcactcaatcttaaagatgcgctggtgtttgaa
tgtaccgacatgagcctaaaagttcataaagacgccaaagggaaaagccagcttcaagtg
acttaccacgggcaagatgcggtgcaagtacaccagttttggccactgaatacgccgcgc
caaaagcagcaatttcacgaccaatttgtacgtccacatctggctgacaaacatcggcct
tttgaggcagcaacgcccgccaaagtcgtggatcatcagcaccgttttcgtccacccctg
tttgtgattgcgcgaaaatcgggccgcttttggaccattcgcgacaaagtatttgccgat
gagttcgcctccccaaccgacgctcacttatcaaaccgagcttataccattcctacttga
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