Vibrio cholerae O1 2010EL-1786: Vch1786_I1148
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Entry
Vch1786_I1148 CDS
T01650
Name
(GenBank) microbial collagenase
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
vce
Vibrio cholerae O1 2010EL-1786
Brite
KEGG Orthology (KO) [BR:
vce00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vce01002
]
Vch1786_I1148
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
vce02042
]
Vch1786_I1148
Enzymes [BR:
vce01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
Vch1786_I1148
Peptidases and inhibitors [BR:
vce01002
]
Metallo peptidases
Family M9
Vch1786_I1148
Bacterial toxins [BR:
vce02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
Vch1786_I1148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
Peptidase_M9_N
PPC
SeqA_N
Motif
Other DBs
NCBI-ProteinID:
AET26750
LinkDB
All DBs
Position
1:1248223..1250670
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AA seq
815 aa
AA seq
DB search
MSFQQRIQHHPIAWACVIAGLSYSSYSQAACEIQDLQPARDLPAQIAVATQACYNSWFYA
PTATLDNLYSEASLAHLQTVLDAEIARYTGEAQQARRLENYGEFIRAAYYVRYNAGREPY
SQALSQRFAQSIDRFLRHPHAFDQGREQVGAMKSLSLMVDNVKQLPLTMDAMILALHRFN
RETAQDTQWVDGLNNLFRAMSGHVGNSEFYRYLAANTQHIDTLYRFALDNEWALETDAEF
LVYNALRETGRLLISPDAITKQKARHVMRQVIARYPLGSKHDKLWLAAVEMLHYYAPEVL
QQLGIDLDAAKRDLAARILPNRFECQGPAIIRSQDLSDAQAAQACDVLDKKEQDFHQVAN
TGLAPVADDYNTRVEVVVFANNSSYVNYSSFLFGNTTDNGGQYLEGNPADQNNQARFVAY
RYANDADLSILNLEHEYTHYLDARFNQYGSFSDNLAHGHIVWWLEGFAEYMHYKQGYQAA
VKLISQGKLSLSDVFATTYSNDTNRIYRWGYLAVRFMLEKHPQDVESLLALSRTGQFDQW
AQSVKLLGERYNTEFSAWLDTLQRDNPDNPDNPDNPDNPDNPEQPNPEPNAVTQLAANSS
LTLTGKAYSEHLFYVDVPEYSREFHVQISGEGDADLYMSYQQVAHYYDYQVTEFTYGSNE
QITFKPEQNGYIKPGRYYLSVTGRADYSAVILNTHLVTEQPNEQPTIKDDLAPVLLEAGN
SQSLTVHRQRYVAIYVPKGVSEVQVWLTASEQNRGNVDLFAAKAYWPTREQFEHASTGAG
SHEYLRIPVTQEGYVHFSLNAQQLGDTVEMVAYFD
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttttcaacaacgtatccaacatcaccccattgcttgggcgtgcgtcatcgctggt
ctttcttactcctcctattcacaagcagcttgtgagatacaagatttacagcccgcgcgc
gatcttcctgcgcaaattgccgtggctacacaagcttgttacaactcatggttttacgca
ccaacggcaaccttggataacctctatagcgaagcttctctagcgcatttacaaactgtg
ctcgatgctgaaattgctcgctatactggtgaagcgcagcaagctcgtcgcttggaaaac
tatggtgagttcattcgcgcagcgtattacgtgcgttataacgctgggcgtgaaccttat
tctcaagcactcagtcaacgctttgctcaatcgatcgaccgctttttacgtcatccgcat
gcttttgaccaaggccgtgaacaggtgggcgcaatgaagagcctaagtttaatggtggat
aacgttaagcagttaccgctcactatggatgcgatgatcttagctctgcaccgcttcaat
cgagaaacggcgcaagatacacaatgggtcgatggtttaaataacttattccgtgcgatg
tctggccatgtgggtaactcggagttttaccgctacttagccgccaacactcaacatatt
gataccttgtatcgattcgctctggacaatgagtgggcattagaaaccgacgctgagttt
ttggtttacaacgctctgcgtgaaactggccgcttattgattagcccagatgccattacc
aagcaaaaggctcgtcatgtgatgcgacaagtgattgctcgctatcctttagggagtaaa
cacgacaaattgtggttagctgccgttgagatgttgcattattacgcacctgaggtgctg
caacagctcggtatcgatcttgatgcagcgaagcgcgatttagccgcgcgcattttgcca
aaccgctttgaatgccaaggccctgccattattcgctcgcaagatctttccgatgcgcaa
gccgcgcaagcctgtgacgtattggataaaaaagagcaagattttcaccaagtggcaaat
acgggattggcaccggtcgctgatgattacaacactcgcgttgaggtggtggtgtttgcc
aataacagcagctatgtcaattactcctcgtttttatttggcaataccaccgacaatggc
gggcagtatttagaaggcaaccctgcggatcaaaacaatcaagcccgttttgtcgcctat
cgttatgccaatgatgcggatttgtcgattctcaatttagagcatgagtacactcattat
ctggacgcgcgcttcaaccagtatggttcgttcagtgataacttagcccatggtcatatt
gtgtggtggttagaaggtttcgcggaatatatgcattataagcagggctaccaagcggcg
gttaagctgatttctcaaggtaaattgagcctttctgatgtgtttgccaccacctactcg
aatgatacgaaccgcatttatcgctggggctacttagcggtacgctttatgttggaaaag
catccacaagacgtggaaagcttgctggcactctctcgtactgggcagtttgatcagtgg
gcacagagtgtcaaattactgggtgaacgctataacaccgagttttcggcgtggctggat
acattgcaacgcgataatccagataatccagataatccagataatccagataatccagat
aatccagaacagcctaacccagaacccaatgcggtcactcagttagcggccaattcgtcc
ttaacactgacaggaaaggcgtacagcgagcatctgttctatgtggatgtgccagagtac
agccgagagttccacgttcagatctccggggagggagatgccgatctgtacatgagctac
cagcaggttgcccattactatgattatcaggtaacggaatttacctatggcagcaacgag
caaattaccttcaaacctgagcagaatggttacatcaaacccggacgctactatttaagt
gtgacaggacgtgcggattactcagcagtcatcctcaacacacacctagtcactgaacag
cctaatgagcaaccgactatcaaagatgatcttgctcctgtgcttttagaagcgggtaac
agtcaaagccttaccgtgcatcgacaacgttacgtcgccatctacgtgccaaaaggcgtc
agtgaagtacaagtatggctcaccgcttcagaacaaaaccgaggcaatgtcgatctgttt
gcagcaaaagcgtattggccaactcgagagcagtttgagcacgcctcaactggtgcgggc
agtcatgagtatttgcgtattcctgtgacacaagaaggctatgtgcacttttcgttaaac
gcacaacaactcggcgacacggtcgaaatggtggcctatttcgactga
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