Vibrio cholerae O1 2010EL-1786: Vch1786_I1179
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Entry
Vch1786_I1179 CDS
T01650
Symbol
pspF
Name
(GenBank) psp operon transcriptional activator
KO
K03974
psp operon transcriptional activator
Organism
vce
Vibrio cholerae O1 2010EL-1786
Brite
KEGG Orthology (KO) [BR:
vce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vce03000
]
Vch1786_I1179 (pspF)
Transcription factors [BR:
vce03000
]
Prokaryotic type
Other transcription factors
Others
Vch1786_I1179 (pspF)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA_2
HTH_8
Mg_chelatase
AAA
AAA_16
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AET26781
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Position
1:1284085..1285101
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AA seq
338 aa
AA seq
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MQQSLLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSL
NCSTLSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRV
IEYGQYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRP
EDIALLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVERAVYQHGLN
SQPIDQLVFNPFQSSDIVTDESEQVDVRHTTRTDFHLPLDYKAWQQQCDIELLQAALTQA
KFNQKHAAQLLGLSYHQFRGMMRKYPQMNSENASPHVE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagagcttgctcggagagtcacctgcgtttttagcggtgttagacaaagtctca
cgtttagcgccgatcgatcgtcctgtgctggtcattggcgagcgcggaacgggtaaagag
ttgatcgcccagcgcttgcactatttatcaaaacgttgggaacaaccgctggtgtcgcta
aactgctcgacgctcagtgaaggactgatcgattcagagctgtttggccatgagtcaggc
tcgtttactggagccaaaggacgccatcaaggacgttttgaacgtgccgaaggcggtacg
ctgtttttagatgaattggccactgcaccactctcagtgcaagaaaaactgctacgcgtg
atcgaatacggccaatatgaacgtgtcggtggtaaccaagtattaaacgcgaatgtgcgc
ttggtatgtgcaaccaacgcgaatttaccgcaaatggctcagcaaggcacatttcgcgca
gacttactggaccgactggcgtttgacgtgattcatttgcccgcacttcgccatcggcca
gaagatattgcgctgcttgccgaacattttgctattcgcatgtgccgtgaactacaactg
ccactctttgttggctttagccccaatgcattacaccaactgcaagcctactcttggccg
ggcaatgtgcgtgagctgaaaaacgtggtggagcgcgcggtgtatcaacatgggttgaat
agccaaccaattgatcagttagtctttaacccgttccaatccagtgacattgtcaccgat
gagtctgagcaggttgacgttcgccataccactcgtaccgacttccatttgcctcttgac
tacaaggcatggcagcaacagtgtgatattgagttgttacaagcggcactcacgcaagcg
aaatttaatcaaaagcacgccgcgcagttgctgggactcagctatcatcaatttcgaggc
atgatgagaaagtacccacaaatgaacagtgaaaacgcctcgcctcacgttgagtga
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