Vibrio cholerae O1 2010EL-1786: Vch1786_I1346
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Entry
Vch1786_I1346 CDS
T01650
Symbol
ompT
Name
(GenBank) OmpT protein
KO
K10940
outer membrane protein OmpT
Organism
vce
Vibrio cholerae O1 2010EL-1786
Pathway
vce05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vce00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
Vch1786_I1346 (ompT)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vce02000
]
Vch1786_I1346 (ompT)
Transporters [BR:
vce02000
]
Other transporters
Pores ion channels [TC:
1
]
Vch1786_I1346 (ompT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_4
DUF2490
Motif
Other DBs
NCBI-ProteinID:
AET26947
LinkDB
All DBs
Position
1:complement(1464129..1465235)
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AA seq
368 aa
AA seq
DB search
MENHLQKTGNRTRNSHIKKRQWINMKKTLLALAVLAAAGSVNAAEILKSDAGTVDFYGQL
RTELKFLEDKDPTIGSGSSRAGVDANYTVNDSLALQGKVEFALKDSGDMYVRNHILGVKT
NFGKFSFGKQWTTSDDVYGADYSYFFGGTGLRYGTLSDALHDSQVKYVYEADSFWVKAGY
GFPEDNAKQELAELYVGATFGDLAVHAGGGQNRDKAFKVGSNTVGTTTTDIKADVTNSYF
EVTGEYTIGDALIGVTYYNAELDVENNPLVIDEDAISVAGTYKVADKTKLYAGYEYVMQE
ANTGADEDGTLVYLGVEYKFASWARVYAEYGYGDGTTLGYTNKGSDAEVKATKVDSANNF
GIGARIYW
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaccaccttcaaaaaacagggaaccggacaaggaattcccatattaagaaaagg
cagtggattaacatgaaaaaaactctattagcactcgcagtgcttgcagccgcaggctct
gtaaacgcagctgaaattctaaaatcagatgctggcacagttgatttttacggtcagcta
cgtacagaattgaaattcttagaagataaagatccaacaattggttctggttcttcgcgc
gctggtgttgatgcaaactacaccgttaacgatagcttagcgttacaaggtaaagtggaa
ttcgcactaaaagacagtggcgatatgtatgttcgtaaccacattcttggtgtaaaaact
aattttggtaagtttagctttggtaaacaatggactacatctgacgatgtatacggtgct
gactactcttatttctttggtggtacaggtcttcgttacggcacactgtctgatgcacta
cacgattctcaagtcaagtatgtttacgaagctgacagcttctgggttaaagctggttac
ggttttccagaagataatgcaaagcaagagctagcagaactgtatgtaggtgcaacattt
ggtgatttggctgtgcacgctggtggtggtcaaaaccgtgataaagcattcaaagttggt
agtaatacggttggcacaacaaccacagatattaaagctgacgtaacaaatagttacttt
gaagtgacaggtgagtacactattggtgatgcactgattggtgttacttactacaacgca
gaactagatgtagaaaataacccactagtgatcgatgaagacgctatttctgttgctggt
acatacaaagttgctgacaagacaaaattgtatgctggctatgagtatgtaatgcaagaa
gcgaacactggcgcagatgaagatggtactcttgtttacctaggtgttgaatacaaattt
gcaagctgggctcgtgtatatgctgagtatggctacggcgatggtacaactctgggttac
accaacaagggttctgacgcagaagttaaagcaacgaaagtcgacagcgctaataacttt
ggtatcggtgctcgtatctactggtaa
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