Vibrio cholerae O1 2010EL-1786: Vch1786_I1738
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Entry
Vch1786_I1738 CDS
T01650
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vce
Vibrio cholerae O1 2010EL-1786
Pathway
vce03030
DNA replication
vce03430
Mismatch repair
vce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Vch1786_I1738 (dnaE)
03430 Mismatch repair
Vch1786_I1738 (dnaE)
03440 Homologous recombination
Vch1786_I1738 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vce03032
]
Vch1786_I1738 (dnaE)
03400 DNA repair and recombination proteins [BR:
vce03400
]
Vch1786_I1738 (dnaE)
Enzymes [BR:
vce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Vch1786_I1738 (dnaE)
DNA replication proteins [BR:
vce03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Vch1786_I1738 (dnaE)
DNA repair and recombination proteins [BR:
vce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Vch1786_I1738 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AET27330
LinkDB
All DBs
Position
1:complement(1867888..1871319)
Genome browser
AA seq
1143 aa
AA seq
DB search
MVDGLSKVPPLVKKVAAMGMPAMALTDFTNLCGLVKFYSTAHNCGVKPIIGADFTLQSEE
FGDELTKLTLLAKNNVGYKNLTLLISKAYLRGHVQHQPVIDKAWLVEHAEGLIVLSGGKS
GEVGRALLKGNQQQVERCIEFYQTHFADHFYLELIRTGRADEESYLHFALDVAEQYDLPV
VATNEVVFITEESFEAHEIRVAIHDGYTLEDPRRPKNYSPKQYLRSEAEMCELFADIPEA
LANSVEIAKRCNVTVRLGEYFLPNFPTGGMAIEDFLVMKSREGLEERLEFLFPDPEVRAK
RRPEYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGPGRGSGAGSLVAYALKI
TDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDKRDQVIDHVAEMYGRDAVSQIITFGTM
AAKAVIRDVGRVLGHPFGFVDRISKLVPPDPGMTLEKAFIAEPALQELYDADEEVKELID
KCRILEGCTRNAGKHAGGVVISPTAITDFAPIYCDAEGNFPVTQFDKNDVETAGLVKFDF
LGLRTLTIIDWALGLVNPRLKKAGKPPVRIEAIPLDDARSFRNLQDAKTTAVFQLESRGM
KELIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREAISYPDEKWQHESLKEI
LEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEMAKQRAVFQEGAEKNGV
DGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPAEFMAAVMTADMDNTEK
VVGLVDECKNMGLTVLPPDINSGLYRFNVDDNGAIVYGIGAIKGVGEGPIEAILEARNKG
GYFKDLFDFCARIDLKKVNKRVIEKLILAGALDRLGPHRAAMMASVDDAVRAASQHHQAE
AFGQADMFGVLTDAPEEVEQKYTQVPEWPEKVRLEGERETLGLYLTGHPVDEYLKELTKY
TSCRLNEAAPTRRDQSLTVAGLVIAARVMTTKRGTRIGLMTLDDRSGRMEVMLYSEALDR
YAEWLEKDKILVVSGQVSFDDFNGGLKMSAREVMDLGSAREKFARGLSISILQSQIDQQF
FERFSHILEPHRAGTVPVNVYYQRPDARARLTLGTEWRVTPSDTLLDELKQLLGHDQVEL
EFN
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggtggatggtttgtccaaagtcccgccattggtgaaaaaagtggcggcaatgggcatg
cccgcaatggccttgaccgatttcaccaacctgtgtggcttggtgaagttttacagcacc
gcgcataactgcggggttaagccaatcattggcgccgactttactttgcaatcggaagag
ttcggtgatgagctgaccaaactgaccttgcttgctaaaaacaatgtcggttacaaaaac
ctcaccttattgatttctaaagcctatttacgcggccatgtccagcatcaacctgtgatt
gataaagcgtggttggtcgagcatgccgaagggctgattgtgctctcgggaggcaaaagt
ggcgaagtggggcgcgcattactcaaaggcaaccaacaacaagtagaaagatgcattgag
ttttaccaaactcactttgccgatcatttctatctagagcttatccgcactggccgtgct
gatgaagagagctacttacattttgcgctggatgtggcagagcagtacgacttgcccgtc
gtggcaaccaacgaagtggtgttcatcactgaagagtcgtttgaagcccacgaaatccga
gtcgcgattcacgatggttatacgctggaagatccacgccgtccgaaaaattacagtccg
aagcagtatctgcgcagcgaagcggagatgtgtgagctgtttgcagacattccagaagcg
ttagccaacagtgtcgagattgccaaacgttgtaacgtgaccgtacgtttgggcgaatat
ttcctacctaacttcccaacgggcgggatggcgattgaagattttctggtgatgaaatct
cgcgaagggttggaagagcgactcgaatttcttttcccagatccagaagttcgtgccaag
cgtcgccctgaatatgatgagcgtttgcaagttgagctcgatgtgattaaccagatgggc
tttcccggatacttcttgatcgtgatggagtttatccagtggtcaaaagataacgatatt
ccagtcggtccgggacggggctcgggggcgggctcattggtagcgtatgcactgaaaatc
accgaccttgatccgctggaatacgatctgctgttcgagcgtttcttgaatccagagcgg
gtctccatgcccgacttcgacgtcgatttctgtatggataagcgtgatcaagtaattgat
cacgtagcggaaatgtatggtcgtgatgcggtatcacaaatcatcactttcggtaccatg
gcggcgaaagcggttattcgcgatgtggggcgtgtacttggtcatccgttcggttttgtc
gatcgcatttccaaattagtgccacccgatccgggtatgacgctcgagaaagcctttatc
gccgagcctgcactgcaagagctgtatgacgcggatgaggaagtcaaagagctgatcgac
aagtgtcgaattctggaaggctgtacccgtaacgctggtaaacacgctgggggcgtggtg
atttcgcccactgccatcactgactttgcgccgatttactgtgatgcggaaggcaacttc
ccggttactcagttcgataagaacgatgtggaaactgccggtctggtcaaatttgacttc
ttggggctgcgtacccttaccattattgactgggctttgggcttagtgaacccgcgtttg
aaaaaggcgggcaaaccccccgtgcggattgaagcgatcccgctcgacgatgcgcgctct
ttccgtaacctgcaagatgccaaaaccaccgcggtattccagctcgaatcgcgcggtatg
aaagagctgattaagcgactgcaacccgactgttttgaagacatcatcgctctggtggcg
ctgtttcgtccggggccgttgcaatccggcatggtggataactttatcgaccgtaagcat
ggccgagaagccatctcttatccggatgaaaagtggcaacatgaatcgctcaaagagatc
ctagaaccgacctacggcatcatcctctatcaggagcaggtgatgcagatcgcgcaggta
ctgtcgggttacaccttgggtggggcagacatgctgcgccgtgcaatgggtaagaaaaag
ccagaagaaatggctaagcagcgcgctgtgttccaagaaggggcggagaaaaatggcgtc
gatggtgagttggcgatgaaaatcttcgatctggtggaaaaattcgccggatacggattt
aacaaatcgcactctgccgcttatgcgctggtttcctaccaaaccttatggttgaaaacc
cactatccagccgagtttatggcggcggtaatgaccgcggatatggacaacacggaaaaa
gtggttggcctagtggatgagtgtaaaaacatgggattgaccgtgttgccaccggacatt
aactcgggtctttatcgctttaacgtcgatgacaacggcgcgattgtttatggtattggc
gcaattaaaggggtgggtgaaggtccgattgaagcgattttggaagcgcgcaacaaaggg
ggatatttcaaagatctgtttgatttctgcgcgcggattgatctgaaaaaggtcaacaaa
cgggtaattgaaaaactgatcttggctggcgccctggatagattaggcccgcatcgcgca
gccatgatggcctcagtggatgatgcggtgcgtgcagcaagccaacatcaccaagcggaa
gcgtttggacaagcggatatgttcggtgtgctcacggatgcgccagaagaagtcgagcag
aaatacacgcaagtgccagaatggccagaaaaagtgcgtttggaaggggagcgcgagacg
cttgggctctatctcaccggccatccggtggatgaatacctgaaagagctcaccaaatac
accagttgccgtttgaatgaagccgcaccaacccggcgtgatcaatccttaaccgttgcc
ggattggtgattgcagcgcgggtgatgaccaccaaacgtggcacgcgaattggtttaatg
actttagatgaccgctcgggccgtatggaagtgatgctttactcggaagcactcgatcgg
tatgcagaatggttagaaaaagataaaattctggtggtttccggacaggtcagctttgat
gacttcaatggcggacttaaaatgtcggcgcgcgaggtcatggacttgggcagcgcgcgt
gaaaaatttgcccgcggtttatcgatctcgattttacagtcgcagattgatcaacaattt
tttgagcgttttagtcacatactggaacctcaccgcgcaggaaccgtacctgtcaatgta
tactaccagcgccctgatgcgcgagcgcgcctgacgttaggcacagagtggcgagtcacg
ccaagcgatacattgttagacgaattaaagcagctacttggtcatgatcaggtagaactc
gaatttaactaa
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