Vibrio cholerae O1 2010EL-1786: Vch1786_I1944
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Entry
Vch1786_I1944 CDS
T01650
Symbol
rumA
Name
(GenBank) 23S rRNA 5-methyluridine methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
vce
Vibrio cholerae O1 2010EL-1786
Brite
KEGG Orthology (KO) [BR:
vce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vce03009
]
Vch1786_I1944 (rumA)
Enzymes [BR:
vce01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Vch1786_I1944 (rumA)
Ribosome biogenesis [BR:
vce03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Vch1786_I1944 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
TRM5-TYW2_MTfase
PCMT
RrnaAD
Methyltransf_15
Cons_hypoth95
Methyltransf_11
MTS
PrmA
Methyltransf_4
Methyltransf_23
FtsJ
Ubie_methyltran
DOT1
TPMT
Methyltransf_12
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
AET27536
LinkDB
All DBs
Position
1:complement(2103258..2104580)
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AA seq
440 aa
AA seq
DB search
MARFFQPKKHSTLDTKHQPVTIERLDHQGSGLAFLHKKPLFVDGALPGEEVLIQLTENKS
KYARGQLIKVLKPSAERVAPFCAHYAQCGGCDLQHLDRAGQIHHKQQALSQLMVKFAGQS
LALSAPVCSDDQGYRRRARLSLMWDKKTQQLQLGFRRKQSKAIVNVTHCPVLEPSLNALL
PDLNALLSEWSQPERLGHVELVKGDNTRVLVLRHLGALIEQDQQRLTDFASQNQLTLYLM
LEAGELQHVQGEAPYCEETGSRLSFLPSHFIQVNRAVNQHMVVQALNWLEVSPQERVLDL
FCGLGNFTLPLAKQAQAVVGVEGVDEMVQHATHNAKLNQINNVAFYQANLEQDMTSASWA
QQKFAKVLLDPARAGAEGIVDQLSALGAKRVVYVSCNPATLARDSQSLLSQGFRLEKLGM
LDMFPHTSHLESMALFVKKG
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtttctttcaaccgaaaaagcacagcacgttagacacaaagcatcagccggtc
actattgaacggttggatcaccaaggcagcggactggcctttttacacaagaaacccttg
tttgttgacggcgctttgccgggggaagaggtgctgattcagctcactgaaaacaagagc
aaatacgcgcgcggtcaactgattaaagtgttgaaacccagcgctgagcgtgttgcacct
ttttgtgcgcattatgcgcaatgtggtggttgcgatttacagcatcttgaccgagcggga
caaatccatcacaagcagcaagccttaagtcaattaatggtgaagtttgcagggcagagt
cttgctctgtctgcgccagtttgttctgatgatcaaggctaccgtcgtcgcgcacgctta
agcctgatgtgggataagaaaactcagcaactacaattgggttttcgccgcaagcagagc
aaagcgatagttaatgtgacccattgccccgtgctggagccgagtttaaatgcgctattg
cctgatttgaacgctttgttgagtgagtggagtcaacctgagcggttggggcatgtcgaa
ttggtgaaaggggataacactcgcgtgttggtgctgcgccatttaggcgcgctgattgaa
caagatcagcagcgtttgactgactttgcttcgcaaaaccaactaaccttatatctgatg
ctggaagcaggcgagttgcaacatgtgcaaggtgaagcgccatactgtgaagaaacaggc
agccgcttaagtttcttgcccagccattttattcaggtcaatcgcgcggtgaatcagcac
atggtcgtgcaggccttgaattggcttgaggttagcccacaagaacgcgtgctcgatctc
ttctgtggcttaggaaatttcacgctgccgctggccaaacaagcgcaagcggtggtgggt
gttgaaggtgttgatgagatggtgcaacacgccactcataacgcgaaattgaaccaaatc
aataatgtggcgttttatcaggccaatttggaacaagatatgacgagcgcctcatgggcg
cagcagaaatttgctaaagtactgctcgacccagcccgcgcaggcgcagaagggattgtg
gatcaactctctgcgttaggtgccaagcgggttgtgtacgtgtcgtgtaaccctgcgaca
ttagcacgagacagtcaaagcttgctgagccaaggatttcgcttagagaaactggggatg
ctcgatatgttcccgcacaccagtcatctcgagtccatggctttgtttgtgaaaaagggc
tag
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