Vibrio cholerae O1 2010EL-1786: Vch1786_I2299
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Entry
Vch1786_I2299 CDS
T01650
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vce
Vibrio cholerae O1 2010EL-1786
Pathway
vce03030
DNA replication
vce03410
Base excision repair
vce03420
Nucleotide excision repair
vce03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Vch1786_I2299
03410 Base excision repair
Vch1786_I2299
03420 Nucleotide excision repair
Vch1786_I2299
03440 Homologous recombination
Vch1786_I2299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vce03032
]
Vch1786_I2299
03400 DNA repair and recombination proteins [BR:
vce03400
]
Vch1786_I2299
Enzymes [BR:
vce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Vch1786_I2299
DNA replication proteins [BR:
vce03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Vch1786_I2299
DNA repair and recombination proteins [BR:
vce03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Vch1786_I2299
NER (nucleotide excision repair)
GGR (global genome repair) factors
Vch1786_I2299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
AET27878
LinkDB
All DBs
Position
1:complement(2448305..2451124)
Genome browser
AA seq
939 aa
AA seq
DB search
MDNPSMAHIPDNPLILIDGSSYLYRAFHAYPGTMSNGEIPTNAIYGVVNMIRSMMRQFAS
DRMAVIFDAKGKTFRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEAD
DVIGTLARQASQAGMPVLISTGDKDMAQLVDDNITLINTMTNVVLDREGVIEKFGIPPEL
IIDYLALMGDKVDNIPGVPGVGEKTATALLQGIGGLEALYANLDKIAALGFRGSKTMAQK
LEENRGNAKLSYQLATIKCDVELEESPQTLLKQTPDRDALMSLYGKLAFKSWLTELLDGG
TGIVTADEQTKTSSVTVSTAATHAAAIPESPAAHIDRSQYQTILNEQDFQLWLEKLKQAE
LFAFDTETDNLDYMVANLVGMSFAVAEGEAAYLPVAHDYLDAPQQLERDWVIAQLKPLLE
DESKAKVGQNLKYDASVMARYGVELRGIRHDTMLQSYVYNSVGGKHDMDSLALRFLQHSC
ISFEQVAGKGKNQLTFNQIALEEAAQYAAEDADVTLRLHQRIHPLIEQDAKLEQVYREIE
MPLVPVLSRIERTGVMIDDMLLSAQSQEIALRLDQLEQNAYELAGQPFNLSSPKQLQTIL
FEQMKLPVLQKTPSGTPSTNEEVLQELALDYPLPKVLIEYRGLAKLKSTYTDKLPKMINP
STGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAPHGWKIMAVDYSQIE
LRIMAHLSGDQALLDAFRDGKDIHAATAAEIIGVPIDQVSSEQRRRAKAVNFGLIYGMSA
FGLAKQLGIPRGEAQEYMDKYFERYPGVMQYMEDTRSRAAQLGYVETIFGRRLHLPEITS
RNAMRRKAAERAAINAPMQGTAADIIKKAMLLVDEWIEREGDGRVKLLMQVHDELVFEVK
ESSLSEIESKVQQLMESAAELAVPLVAEAGHGDNWEQAH
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
ttggataatccttctatggctcatatacctgacaatccattgattttgatcgacggctcc
tcttacctttatcgcgcatttcatgcttacccgggcaccatgagtaatggtgaaatccca
accaacgccatctatggtgtggtaaacatgattcgcagcatgatgcgccagttcgcttcg
gatcgcatggcggtgatttttgatgccaagggaaaaaccttccgtgatgagatgtacgat
caatacaaggctcatcgtcctcctatgccagatgagttgcgctgtcaggttgaaccttta
caccaagttattcgcgctatgggtttaccgctgttggcgattgaaggtgtagaagctgac
gatgtgattggtacgttggcgcgccaagcctcacaagctggtatgcctgttttgatcagt
accggcgataaagatatggcgcagttggtggatgataatattaccctgatcaataccatg
accaacgtcgtgctggatcgcgaaggtgtgattgaaaaattcggtatcccgccagagctt
attatcgactacctcgccttgatgggtgataaagtggataacattccgggcgtacctggg
gtgggtgaaaaaaccgcgaccgcacttttgcaagggattggcggcttagaagcgctgtac
gccaacctcgataaaatcgctgctttaggcttccgtggctcaaaaaccatggcacaaaag
ctggaagagaaccgcggtaatgccaagctttcttatcaactcgccaccatcaaatgtgat
gtcgagcttgaggaatctccgcaaaccctgctaaagcaaacgccagatcgagatgcgttg
atgtcgctctacggtaagctcgcctttaaatcttggctgaccgaattgcttgatggtggt
acaggtattgtgacggcggacgagcaaacgaaaacctcttcagttactgtttcaaccgca
gcaactcatgcggctgcgattcctgaaagccctgcggcccacatcgatcgcagccagtat
caaaccatcctaaacgaacaagacttccagctttggttagagaagttaaaacaagccgag
ctgtttgcctttgatacggaaaccgacaaccttgattacatggtcgccaatttggtgggg
atgtcgtttgcagttgccgaaggtgaagcggcttatctgccagttgcgcacgattatctg
gatgcgccgcagcagttggagcgcgactgggtgattgcccagctaaaacctctgcttgaa
gatgaaagcaaagccaaagtgggccaaaacctcaaatacgatgcgagcgtgatggcgcgc
tacggcgttgagctgcgtggtattcgccatgacactatgctgcaatcctacgtctataac
agcgtgggcggcaaacatgatatggatagtttagcgctgcgttttttacagcacagctgt
atctcgtttgaacaagtggcaggtaagggtaagaaccagctcacctttaaccaaatcgct
ttagaagaagcggcacaatacgcggcagaagatgcggatgtgacgttgcgtctgcatcag
cgaattcatccgttgattgagcaagacgctaagcttgagcaagtgtatcgcgaaatcgaa
atgccgctggtacctgtgctatcacgtattgaacgtacgggcgtgatgatcgacgacatg
ctgctcagtgcccaatcgcaagaaattgcgttacgtttagatcaattagaacaaaatgct
tatgagttggcaggtcagccgttcaacttaagctcgccgaagcagctacaaaccattttg
tttgagcagatgaagctgcctgtcttgcaaaaaacgccatccggtaccccttcaaccaat
gaagaagtgttgcaagagctggctttggattacccactgcccaaggttctgattgagtac
cgcggtctggccaaactcaaatcgacctataccgataagttgccgaagatgattaaccca
agtacagggcgcgtgcatacttcctatcatcaagcagtgacggccactgggcgtctctcc
tccactgatcctaacttgcagaacattccagtgcgtaatgaagaaggacgccgtattcgc
caagcgtttgttgctccgcatggttggaaaatcatggcggtcgactactcgcaaatcgag
ctgcgcatcatggcgcacctgtcgggcgatcaggcgttattggatgctttccgtgatggg
aaagatatccatgcggcgacagcagcagaaatcattggtgtgccgattgatcaagtgagc
agtgagcagcgtcgccgagcgaaagcggtgaactttggtttgatctacggcatgagtgcg
tttggtctggcaaaacagctcggtattccacgcggtgaagcacaagagtatatggataaa
tactttgagcgttatcccggcgtgatgcagtacatggaagatacgcgtagccgtgctgca
caattgggttatgtcgaaaccatcttcggtcgtcgcttacatttgccggaaatcacctca
cgtaacgctatgcgtcgcaaagcggctgagcgggcagcgatcaacgcaccgatgcaaggc
accgcggcagacatcatcaaaaaagccatgttgttggtggatgagtggattgagcgggaa
ggtgatggccgagtcaaattgctgatgcaagtacacgatgaattggtctttgaagttaaa
gagtcatctttatccgaaattgaaagtaaagtacaacagctgatggagtcagcggccgag
cttgcagtacctttagtggccgaagccggccacggcgacaactgggagcaggcgcactag
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