Vibrio cholerae O1 2010EL-1786: Vch1786_I2591
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Entry
Vch1786_I2591 CDS
T01650
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
vce
Vibrio cholerae O1 2010EL-1786
Pathway
vce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Vch1786_I2591 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vce03021
]
Vch1786_I2591 (rho)
03019 Messenger RNA biogenesis [BR:
vce03019
]
Vch1786_I2591 (rho)
Transcription machinery [BR:
vce03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Vch1786_I2591 (rho)
Messenger RNA biogenesis [BR:
vce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Vch1786_I2591 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
AAA_25
OB_RNB
AAA
S1CSD-TOTE-2
DnaB_C
Motif
Other DBs
NCBI-ProteinID:
AET28154
LinkDB
All DBs
Position
1:2742303..2743562
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AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSDLVKLGESLGLENLARLRKQDIIFAILKAHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDSIAGKIRPPKEGERYFALLKVNTVN
DDRPDNARNKILFENLTPLHANERMVMERGNGSTEDITARVLDLAAPIGKGQRGLIVAPP
KAGKTMLLQNIAQSIASNHPECVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLNRKIAEKRVFPAIDF
NRSGTRREELLTKTDELQKMWILRKIVHPMGETDAMEFLIDKLAMTKTNDEFFDAMRRQ
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatctaacagaactgaagaacacccctgtgtctgatctggttaagcttggcgaaagt
ctgggccttgaaaacctggcacgcctacgcaaacaagacattattttcgcaatcctcaaa
gcacacgcaaaaagtggtgaagacatttttggcgatggggttctggaaattcttcaagac
ggttttggtttcttacgtagtgcagacagttcataccttgctggccctgacgacatctat
gtgtcacctagccaaattcgtcgctttaacctacgtacaggcgactcaattgccgggaaa
attcgtccgccgaaagagggtgaacgttactttgcattgctcaaagtgaacactgtaaac
gatgaccgtccagacaacgcccgcaacaaaatccttttcgagaacttaactcctctacac
gccaatgaacgtatggtgatggaacgtggcaatggctccacagaagacatcacggcgcgt
gttctcgatttggcagcaccgattggtaaaggtcaacgtggtttgatcgttgctccgcca
aaagcgggtaaaaccatgctgctacaaaacatcgctcaaagcatcgccagcaatcaccct
gagtgtgtgctgatggtactgctgattgacgagcgtccagaagaagtgactgagatgcag
cgcctagtaaaaggtgaagtggttgcttcaacctttgatgagccagcatcgcgccacgta
caagtggcagaaatggtgattgaaaaagccaaacgtctggttgaacacaagaaagacgtg
gtgatcctactggattcaattactcgtctagcgcgtgcctacaacactgtggttcctgca
tcaggtaaagtactgaccggtggtgtggatgcgaacgcattgcatcgtcctaagcgtttc
tttggtgcggcacgtaatgtagaagaaggtggtagcttgaccatcatcgctactgcactg
gttgataccggttctaagatggatgaagtgatttatgaagagttcaaaggtacaggtaac
atggaactgcacttgaaccgtaagattgctgaaaaacgtgttttcccagctatcgacttc
aaccgttcaggtacgcgtcgtgaagagttactgactaagaccgatgagctacaaaagatg
tggattctacgcaagatcgttcacccaatgggcgaaaccgatgcgatggaattcctgatt
gataagttagccatgaccaaaaccaacgatgagttctttgacgcgatgcgtcgacagtaa
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