Vibrio cholerae O1 2010EL-1786: Vch1786_I2840
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Entry
Vch1786_I2840 CDS
T01650
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
vce
Vibrio cholerae O1 2010EL-1786
Pathway
vce05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vce00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
Vch1786_I2840 (rpoS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vce03021
]
Vch1786_I2840 (rpoS)
Transcription machinery [BR:
vce03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Vch1786_I2840 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AET28368
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All DBs
Position
1:2975770..2976777
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AA seq
335 aa
AA seq
DB search
MSVSNTVTKVEEFDFEDEALEVLETDAELTSDEELVAVEGASEDVREEFDASAKSLDATQ
MYLSEIGFSPLLTAEEEVLYARRALRGDEAARKRMIESNLRLVVKISRRYSNRGLALLDL
IEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERALMNQTRTIRLPIHVVKELNIYL
RTARELSQRLDHEPTPEEIALELDRPVDDVTKMLRLNERISSVDTPIGGDGDKALLDILP
DSHNADPEFSTQDDDIRESLLNWLDELNPKQKEVLARRFGLLGYEPSTLEEVGREINLTR
ERVRQIQVEGLRRLREILVKQGLNMEALFNVEYDN
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcagcaataccgtaaccaaagtagaagagttcgattttgaagatgaagcactg
gaagtgctagaaactgatgccgagctcaccagtgatgaagaattagttgctgttgaaggg
gcaagtgaagacgttcgtgaagagtttgatgcttctgcgaaaagtcttgatgcgacccag
atgtatctcagcgaaattggtttttcaccgctccttactgccgaagaagaagtgctttat
gctcgtcgtgccttacgtggtgatgaagccgcacgtaaacgcatgattgaaagtaacttg
cgtctggtggtaaaaatttcacgccgttacagcaaccgaggattagcactgctcgatctg
attgaagaaggtaatcttggtctgatccgtgcggttgagaaattcgatccagaacgcggt
ttccgcttctctacctacgcaacatggtggatccgtcaaaccattgaacgtgcgctgatg
aaccaaacacgcaccattcgtctaccgattcatgtcgtcaaagagctgaacatttatttg
cgtactgctcgcgaattatcacagcgccttgaccacgaacctacaccagaagaaattgct
cttgagttagaccgacctgtcgatgatgtcactaagatgctgcgtcttaacgaacggatc
agctcagtggatacgccaattggtggggatggagataaggcactgctggatattttgcca
gactctcacaatgccgatcctgagttttcaactcaagatgatgacattcgtgaatcgctg
ctcaactggttggatgaacttaatccaaagcaaaaagaagtgcttgcgcgtcgctttggg
cttcttggctatgaaccatcgaccttggaagaagtgggtcgtgagatcaatctcactcgt
gagcgtgttcgccaaatccaagtggaaggtctacgtcgtctgcgtgagattttggtgaaa
caaggtttgaatatggaagcgctgtttaacgtcgaatacgacaactaa
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