Vibrio cholerae O1 2010EL-1786: Vch1786_II0768
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Entry
Vch1786_II0768 CDS
T01650
Name
(GenBank) ABC transporter transmembrane region
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
vce
Vibrio cholerae O1 2010EL-1786
Pathway
vce02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vce00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vch1786_II0768
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vce02000
]
Vch1786_II0768
02044 Secretion system [BR:
vce02044
]
Vch1786_II0768
Transporters [BR:
vce02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Vch1786_II0768
Secretion system [BR:
vce02044
]
Type I secretion system
Adhesin protein transporter
Vch1786_II0768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
PhoR
Zeta_toxin
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AET29186
LinkDB
All DBs
Position
2:737822..739936
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AA seq
704 aa
AA seq
DB search
MQDTLLNSLVYVSRYYGLANSPEALINGLPLADGKLTPFLFPRSAERAGLIAKENRAPLD
QIPHLVFPVVLLLKGGEACVLNSINQETQEAEIVTAESGLVPVAYSLSDLEAMYIGRYFM
VKKQFRFDERSPEVLKPRDGHWFWSTIYKSKHIYRDVLIASLLINLFAVAAPMFSRIVYD
KVVPNLAFETLWVLSSGILVIFLFDFVFKMLRSYFIDVAGKKSDILISSKLFSKVMGIRM
EARPPSVGAFARHLQEFESIREFFTSATISSLIDLPFALLFLVLIWLMAGHLVWVPVIGV
LILVIYSFLIQSRLKRAIEEGSRLASQKYANLIESLAGLETVKLFGAQGQFQYRWEEAVA
HMANWNIKSRRITDSIQNTAGFVQQAANIGMIIVGVYLISNGDLTMGGLIAATMLSGRAI
GPLVQLSLLSTRYNQAKSSMTIIEQVMSMPDEQEEGKRYIHRPIIQGKIELDRVTFHYPN
SPIASVRDLSLTIHPGEKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLHHI
DIRRNIGCVPQDSVLFYGSIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDPAGLERQV
GEGGMLLSGGQRQSVSIARAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLKPSETLIL
ITHKTSMLDVVDRVIVMEKGCIIADGPKHEVLNDLRQGNVRAVQ
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatacgttactcaattcgctggtgtacgtaagccgttattatggtttagcgaat
tctcctgaagcactgatcaacggcttaccgttggctgacggcaagctcacgccttttctg
tttcctcgctcggcggaaagagctgggctgatcgcaaaagaaaaccgcgcgccgttagac
caaattcctcatctggtgtttcctgtggtattgctgctcaaaggcggtgaggcctgcgta
ctcaatagcatcaatcaggaaacgcaagaggctgaaattgttaccgcagagtcggggtta
gtccccgtcgcttactcgctcagtgatttagaagcgatgtatattggccgttactttatg
gtcaaaaagcagtttcgctttgatgaacgctcaccagaagtcctgaaacccagagatggg
cactggttttggagcaccatctataaatccaagcatatttatcgcgatgtgttgatagcg
tcactgctgattaacttgtttgccgttgcagcgccgatgttttcacggattgtgtacgac
aaagtcgtccccaatttggcttttgaaaccttgtgggtgctctctagcggcatcttagtg
atctttttgttcgatttcgtatttaaaatgctgcgcagctacttcattgatgtcgcagga
aaaaaatcggacattctgatctcttccaaactgtttagtaaagtgatgggcatccgcatg
gaggctcgcccaccttcggttggtgcttttgctcgccatttgcaagagtttgaatcgatt
cgtgaattttttacatccgcgacgatttcttcactgattgatctgccattcgccctgctc
tttttagtgttgatctggttaatggctggacatttggtgtgggtgcctgtgatcggtgtc
ctgattttggtgatttactcatttctcattcaaagccgcttaaaacgggcaattgaagaa
ggctcaagactcgcctcacaaaagtacgccaacctcatcgaaagcttagcaggactagaa
acggtgaagctgtttggcgcgcaaggacaattccagtaccgctgggaagaagccgtagcg
cacatggcgaattggaacattaaaagtcgccgcatcaccgatagtattcaaaacaccgcc
ggttttgtgcagcaagcagccaatatcggcatgatcattgtcggggtctacctgatttcc
aacggtgacctgaccatgggtggactgattgccgcaacgatgctcagtggccgtgcgatt
ggccccttagtacagctctcactgctttcaacccgttacaaccaagccaaatcttctatg
actatcattgaacaagtgatgtcgatgcctgatgaacaggaggaaggcaaacgctatatc
catcgtcccatcattcaaggcaagattgagctggaccgcgtgactttccattatccaaat
tcacctatcgcctccgtccgtgatttaagtcttaccatccatccgggtgaaaaagtggcg
attattggtagaattggttcgggtaaaaccacgcttgagcgcttgatcatgggcctgtac
aagccaactgaagggcatgtgcgaattgatgatacggatatctcgcagctgcatcacatc
gatattcgccgcaatattggctgtgtaccgcaagacagtgtgctgttttatggctcgatc
cgcgacaacattacgctcggtcgcccactttccgatgatcgtgaggtaatggatgcggcc
aaccgagcgggtgttacggtctttactcaacaagatcctgcggggctagaacgtcaagtg
ggtgaagggggtatgctgctctcgggtggtcaacgtcaatctgtgtcgattgcgcgcgct
ttccttggccgccctcccgtcttactgatggatgaacccaccagcgcgatggataaccgc
tcagaaatgcacattaagcaacaacttagccaactcaagccaagtgagacgctgatcctt
atcacccacaaaacctcgatgctggatgtggttgatcgcgttattgtgatggagaaaggc
tgcattattgccgatggtccaaagcacgaagtgctgaacgatctgcgccaaggtaatgta
cgcgcagtgcaatag
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