Vibrio cholerae O1 El Tor FJ147: IR04_00270
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Entry
IR04_00270 CDS
T03827
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcf02000
]
IR04_00270
Transporters [BR:
vcf02000
]
Other transporters
Pores ion channels [TC:
1
]
IR04_00270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF769
Motif
Other DBs
NCBI-ProteinID:
AJZ97694
LinkDB
All DBs
Position
II:70873..73014
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AA seq
713 aa
AA seq
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MKLSPVSAAVLSVLAAGFAHAETEPSHYEEVVVTANRIEQPLSEVAGSVAVLEGETLEKQ
GKTELYDALNQEPGVSVTGGAGRPQNITIRGMTGNRIAIVRDGIQSADGYGAADINDKYG
RNTFSLSNVKQIQVVKGASSTLYGSGAIGGVVIIESKAPEDYLYHRDYYVDAALTYSGIS
NRYQGNHALAMRHGDGEALLTIDYWQGEETRNFNQDLYNREVDGYNLGFSHHYWLNDALR
LKTHLEYFDDYAKRREGTSSIQKDDKWDLVSFYEYQRSQTRLASVGADYTANLSWMDTLE
GKFYWRSTENITQTNRLMANDRSGAGILSYRRELRDEGFNDEALGATLNAQKEWQQGEWL
HQFAYGMSVDGHDYQRPKSIRRMESSGDDLQADEPFAPAREYRFGVYGQDNLLLGDWTLA
AGLRFDAQKLSPKNTDRIHGYKVVTMGSSEWSPSASISYQWHPEWNTYLSYNHGFRAPSY
DKAYGASDHSFVPLTPFIIKPNNKLRAETSDSFELGSKYDNGQTQFYVAVFYSIFDNFID
VKQVGYDNATGSVIQQYQNIAGVKTYGAEMSVMHRLDDRWSVENKLGYVDGKDGENQYVR
TLTPLEGSVQLNYQRERWDAYSRLNWASAMSRVPTCTTEQGKETECATTTGWVSWDIGLN
YQWNAQLSASFNVVNLLDREYTRYQDVAGVTPSDTLYSTEPGRYFTVHAKYVF
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttctccagtatcagctgcggtacttagcgtactcgcggcagggttcgctcat
gccgaaactgagcctagccactacgaagaagtggtggtgacggccaatcgcattgagcag
cctttgtcagaagtggcgggctcagtggcagtgcttgaaggggaaacccttgaaaagcaa
ggcaagaccgagttgtacgatgcattgaatcaagagccgggtgtcagcgtgactggcgga
gcgggacgcccacaaaatattacgattcgtggcatgaccggcaaccggatagcgattgtt
cgtgatggcattcaaagtgcggatggttatggcgctgcagatattaacgacaagtatggc
cgtaacacatttagcctgagcaatgtgaaacagatccaagtggtgaagggcgcgagttca
accctatacggttctggtgcgattggtggcgtcgtgatcatcgaaagtaaagcgccggaa
gattatttgtaccaccgtgattattacgtggatgccgcattgacctactcaggcatcagc
aaccgctaccaaggtaaccacgcgttagccatgcgtcacggtgatggcgaggcgctgctc
acgatcgactactggcaaggtgaagagacacgtaactttaatcaagatctgtataaccgc
gaagtggatggttacaaccttgggttctcccatcattattggttaaacgatgcgctgcgt
ttaaaaacgcacttagagtattttgatgattatgccaagcgtcgcgaaggcacctcttct
atccaaaaagatgacaagtgggatctggtcagcttttacgagtatcaacgcagccaaacg
cgtctggccagcgttggtgccgattacacggctaatctaagttggatggatacgctggaa
ggaaaattctactggcgcagtacagaaaacatcacacagacgaaccgtttgatggcgaat
gatcggtctggcgctggcatcctctcctatcgtcgtgaactgcgtgatgaagggttcaat
gatgaggcgttaggagccacgctcaatgcgcaaaaagagtggcaacaaggtgagtggctg
catcagtttgcttacggtatgagcgttgatggtcatgattaccagcgtccgaaatcgatt
cgacggatggaatcttcaggtgacgatttacaagccgatgagccgtttgctcctgcgcgt
gagtaccgttttggcgtctacggacaagacaatctcctcttaggcgattggacgctggct
gcgggtttgcgttttgatgcgcaaaaattgagccctaaaaataccgatcgtattcatggc
tacaaagtggtgaccatggggagcagtgagtggtcacccagtgcctcaatctcttatcaa
tggcatccagaatggaatacttacctgagctacaaccacggcttccgtgcgccaagttat
gacaaagcgtatggcgcaagcgatcacagttttgtcccgctaacgccatttattatcaag
cccaacaataagttacgcgctgaaaccagcgacagtttcgagttgggcagcaaatacgac
aatggtcagacgcaattttacgtggccgtgttttattccatcttcgataactttattgat
gtcaaacaagtcggttatgacaacgccacagggtcggtgattcagcagtaccaaaatatc
gcgggcgtcaaaacctacggggctgaaatgtcggtaatgcatcgtctagatgatcgttgg
agtgtcgaaaataagctcggatacgtggatggtaaagatggtgaaaaccaatacgtgcgc
accttaaccccactagaagggagtgtgcagctcaactaccaaagagagcgatgggacgct
tacagccgcctgaactgggcgagtgccatgagccgagtgccgacttgcaccacagagcaa
ggcaaagaaactgaatgtgccacgaccacaggttgggtgagttgggacatcggcctcaac
taccaatggaacgcacagctgagtgccagtttcaacgtggttaacctgctcgatcgagaa
tacacgcgctatcaagatgtcgctggtgtgacgccaagtgacaccctctattccacggag
ccgggacgctatttcaccgtgcacgctaagtatgtgttctag
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