KEGG   Vibrio cholerae O1 El Tor FJ147: IR04_00485
Entry
IR04_00485        CDS       T03827                                 
Name
(GenBank) type VI secretion protein
  KO
K11896  type VI secretion system protein ImpG
Organism
vcf  Vibrio cholerae O1 El Tor FJ147
Brite
KEGG Orthology (KO) [BR:vcf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vcf02044]
    IR04_00485
Secretion system [BR:vcf02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   IR04_00485
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: AJZ97735
LinkDB
Position
II:119317..121086
AA seq 589 aa
MTQDKYFREELAFLKEQGKEFTEIHPQLSRFLHGRTTDPDVERLLEGFAFLTARLREKVE
DEFPELTHSIINMLWPNYLRPIPSMSVVAFEPDKSVSEKQVIPRNTQLDSKPVFGTACHF
NTCRDVALYPMQCQGVHAEHTREATTIQISLRMLGDMTVGDAKLDTVRFYLGGDKYSSQT
LYLWLHHYLQKMTIEVQGVEFALPADAFSTVGFSSDQALLPYPKNVYDGYRILQEYLSFP
EAFHFFDVKGFAKALPKAVSGDFTLRIHFSKTLPADTRVRQDNFQLYCTPVINLFEHDAD
PIDLTGRRSEYRIVPSSRYPAHYEIFSVDQVVGWQDTQSEGKRIRGEKRIYSSFESFQHE
VERVRHRQALYYRTRVKESIRGDGFDSFISFVRGDETLSMGVDEAVSIKLTCTNRLLPLE
LGVGDICVATDSSPPFATFKNITVPSQSLRPVLDGSLLWTLISNLSLNYLSLLSKDALSC
VLRAYDFRALVDRQAERVARMRLDGIVKIESKPVDKILRGLPVRGLQSTLYVDQAGFGSE
GDLFLFGTVLSHFFALYASINSFHELVVVNISNQEKYSWGTQSGMQPLI
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgacgcaagacaagtatttcagggaagagctcgcttttttaaaagagcaggggaaagaa
tttaccgaaattcaccctcagctttcgcgttttcttcatggccgtacgaccgatcctgac
gttgagcgtcttctggaaggttttgcatttcttaccgcgcgtttgcgcgaaaaggtggag
gatgagttccctgaacttactcactccatcattaacatgctgtggccaaattatctgcgc
cctatcccgagcatgagtgtggtggcgtttgaacctgacaaaagtgtcagcgagaagcaa
gtcatcccacgtaatacccaattggatagcaagccagtctttggcacggcgtgtcatttc
aacacttgccgtgatgtcgcgctgtatccgatgcagtgtcaaggtgttcatgccgagcac
acacgtgaagccacgaccattcagatctcgttgcgcatgctgggcgatatgacagtaggc
gacgctaagctcgataccgtacgtttttacttaggtggtgataaatacagctcgcagact
ctctatctttggttacaccattatctacaaaaaatgaccattgaagtgcaaggtgtcgag
ttcgcactgcctgctgatgcgttttcaaccgttggtttctcaagtgaccaagctttgctg
ccttatccaaagaatgtctatgacggttatcgtattttgcaagagtacctgtcgtttcct
gaagcctttcacttctttgatgtaaaaggttttgccaaagctttaccgaaagcggtcagc
ggtgatttcaccttacgcatccatttttcgaaaacattgcctgctgatacgcgagtgcgt
caggacaattttcaactctattgcacaccggtcatcaatctgtttgagcatgatgccgat
ccgatcgatttgactgggcgtcgttcagagtatcgaatcgtcccgtccagtcgctatcct
gcccactatgaaattttcagcgtggatcaagtggttggttggcaagatacccagtcagaa
ggcaaacggatccgcggagagaagcgtatctactcttcttttgaaagcttccaacatgaa
gtggaacgggttcgtcatcgtcaagcgctttactatcgcacacgagtcaaagagagcatc
cggggggatggttttgattcatttatctcttttgtgcgcggtgatgaaaccttatcaatg
ggcgtagatgaagccgtctcaatcaaactcacctgcaccaatcgcttgctgccattggaa
cttggggtgggggatatttgtgtggcgaccgacagctcacccccttttgccacatttaaa
aatattacggtgccttcgcagtcactgcgcccggttctcgatggcagcttactgtggacg
ctgatctcgaatctatcgctgaactacctatcactgctttcaaaagatgcactgagctgt
gtgctacgcgcttacgattttcgcgccttggtcgataggcaagctgaacgtgtcgcacgg
atgcgccttgatggcatagtcaaaatagaatctaaaccggttgataaaatcctacgtggt
ttgcctgtgcgtggtttgcaatcgactttgtatgtcgatcaagcgggatttggctcggaa
ggtgatttgttcctgtttggtacggtactcagtcatttctttgcactttacgccagcatc
aactcatttcacgaattagtcgtggttaacatcagcaatcaagagaagtactcatggggc
acacagagcggaatgcagccgttgatctga

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