Vibrio cholerae O1 El Tor FJ147: IR04_01030
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Entry
IR04_01030 CDS
T03827
Name
(GenBank) ligand-gated channel
KO
K16087
hemoglobin/transferrin/lactoferrin receptor protein
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcf02000
]
IR04_01030
Transporters [BR:
vcf02000
]
Other transporters
Pores ion channels [TC:
1
]
IR04_01030
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AJZ97838
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Position
II:253614..255593
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AA seq
659 aa
AA seq
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MDICKKSALWLAITAAMSANAVAEQKATPEQENVVIWGTKVSSSSESLTTDDLSLKQADH
MSDLLRDIPGVDVGGTHSVNQRINIRGLGETNLDIRLDGASQHANMFHHIGNLTLNPDIL
KSADVQVGNNSVTQSGLGGSVYFETKNAKDLLVGGEQFGARIFGGYASNDNQQGSLTVYG
QLSETVDAMVYGQGISRDNFEDGAGKETFGVKGDTYNVLAKVGFEPAVGHRFQVSYDVYR
DQGDYSPRPDMAGSANLGLSKNRLVPTHYDRDTITGSYELKQDKHRGKVTLYSSQTEIDR
DESVMAGVWPGNRLSRNTATNRNVGINALFQSDYELAAHRNQVSYGMDYVDQTSKATYGS
TPFMEESAVSTAVFAENKLYVNDVWSLTAGLRFDDFKRKAMTGTKDFDEVTWSLGTEWDV
TSDWTLFANARSLFKGPELLETFVRYQDQARLADNIKPETGLNTQGGVRFDKTYGDHFVG
ANFTLFKTQIDDHIRTSNSYLISNVGDMEIKGFELSTTYAYQAASAKLSYAHSDANDVTN
GGPMLNSVGNSADMGDSIALSLGYQADSIDTLFGWTSIVVLDEDNVVAGAAKKEGYDVHN
LYAQWTPYSVPNLVLTFGVDNVFDELYVSHASRVGLAKSFVADDYEPGRSYKLSAAYQF
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggatatttgcaagaagtctgcgttatggcttgcgatcactgccgcgatgtcggccaac
gcggttgctgagcagaaagcgacaccggagcaggaaaatgtggtgatctggggtacgaaa
gtatcgagcagctcggaatctctcaccacggacgatctatcactcaaacaagccgatcac
atgtcggatttgctgcgtgatattcccggggttgatgtaggcggaacgcactcggttaac
caacgaattaacattcgcggattgggtgaaaccaacctggatattcgtttggatggcgct
tcacagcacgccaatatgttccatcacattggtaacttaacgcttaacccagacattttg
aaatcagccgatgtgcaggtgggtaacaactcagtgacccaaagtggcctcggtggttcg
gtttattttgaaaccaagaatgcgaaagatctgctggtgggtggtgagcagtttggtgcc
cgtatcttcggcggttatgcctcaaacgataaccagcaaggttcactcacggtttacggt
caattgagcgaaacggttgacgccatggtttatggtcaaggtatctcacgcgataacttt
gaagatggtgccggtaaagaaacttttggcgtgaaaggggatacctataacgttcttgca
aaagtcggctttgaaccggctgttggtcatcgattccaagtttcctatgatgtctatcgt
gatcaaggggactatagcccacgccctgatatggcaggaagtgccaacctaggtttgagc
aaaaaccgtttggttccgacgcattatgaccgcgataccatcactggctcttatgaactc
aagcaagataagcatcgcggtaaagtcaccctctacagtagccaaaccgaaattgatcgt
gatgaaagtgtgatggcgggtgtttggccgggcaaccgcctttcacgcaatacggcgaca
aaccgcaatgttggcattaacgcgctcttccaatctgactatgaactggccgcgcaccgt
aaccaagtaagctatggtatggattatgtcgatcaaaccagcaaagcgacctatggcagc
accccatttatggaagaatctgcagtttctaccgctgtgtttgcggagaacaaactgtat
gtaaatgacgtttggtcattgaccgccggtctgcgttttgatgatttcaaacgtaaagct
atgacaggcacgaaagattttgatgaggtgacttggtcactgggtacggaatgggatgtg
accagtgattggacgctgtttgccaacgcccgctcgctattcaaaggcccagagctgctg
gagacctttgttcgttaccaagatcaagctcgcttagcggataacatcaaacctgaaacg
ggcttaaacactcaaggtggtgtgcgctttgataaaacttatggcgatcactttgtgggt
gccaacttcaccctgtttaaaacccagattgatgaccatattcgtactagtaacagttac
ctgatcagtaacgtaggggatatggaaatcaaaggttttgaactgagcacaacttacgct
taccaagccgcgagcgccaagctctcttacgcgcactcggatgcgaatgatgttacaaat
ggtggcccaatgctcaattccgttggtaacagcgccgatatgggtgacagcatcgcgctc
agcttaggttatcaagcggattcgattgataccctgtttggctggacttcaatagtggtt
ctggatgaagacaacgtagtggctggcgccgccaagaaagaaggctatgacgtgcataac
ctgtatgctcagtggacgccatattccgtcccgaacctagtgctgacgttcggcgtggat
aacgtgtttgatgagctttatgtgtctcatgcctcacgtgttggtttagcgaaaagcttt
gtagccgatgattacgagccgggacgcagctataagttatccgccgcttaccaattctaa
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