Vibrio cholerae O1 El Tor FJ147: IR04_01290
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Entry
IR04_01290 CDS
T03827
Symbol
thrS
Name
(GenBank) threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IR04_01290 (thrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vcf01007
]
IR04_01290 (thrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcf03016
]
IR04_01290 (thrS)
Enzymes [BR:
vcf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
IR04_01290 (thrS)
Amino acid related enzymes [BR:
vcf01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
IR04_01290 (thrS)
Transfer RNA biogenesis [BR:
vcf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
IR04_01290 (thrS)
Prokaryotic type
IR04_01290 (thrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
CCDC168_N
Motif
Other DBs
NCBI-ProteinID:
AJZ97887
LinkDB
All DBs
Position
II:306522..308450
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AA seq
642 aa
AA seq
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MPIITLPDGSQRHFDNPVSTLEVAQSIGPGLAKATIAGRVNGARVDACDLIEHDASLEII
TTKDEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDSGFYYDIDLEQSLSQEDLEK
IEARMVELAKTKYAVVKKKVSWQEARDTFESRGESYKMEILDENVARDDRPGLYHHEEYI
DMCRGPHVPHMGFCQNFKLLNIAGAYWRGNSDNKMLQRIYGTAFHDKKALQAHLTRLEEA
AKRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMM
DRVLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFG
SCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQNIVVK
LSTRPEKRVGSDEIWDKSEQALIDSLKAMDIPFEIQEGEGAFYGPKIEFTLYDCLDRAWQ
CGTVQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEYAGFFPTWLAP
EQAVVVNITDKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPYMLVCGDQ
EMEAGEIAVRTRKGKDLGKFKLDDFIAHIQAEIASRKLNLEE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcctattattactcttcctgacggtagtcagcgtcattttgacaacccagtatctact
ctcgaagttgcccaatctatcggcccaggtcttgcgaaagcgaccattgccggtcgtgtg
aatggtgcacgcgttgatgcttgcgatctgattgaacacgatgccagcctagaaatcatc
accacgaaagatgaagtcgatggtttagaaatcgtgcgtcactcatgtgcgcacttgctt
ggccatgcactgaagcagctttacccaaatgcgaaaatggcgattggtccaaccatcgac
agcggtttttactacgacatcgatctcgagcagtctctctctcaagaagatcttgagaaa
atcgaagctcgcatggttgagttagcgaaaaccaaatacgcggttgtcaaaaagaaagtg
agctggcaggaagcgcgcgatacctttgaatcgcgtggcgaaagctacaaaatggaaatt
cttgatgaaaacgtggcgcgtgatgatcgcccgggtctttaccatcacgaagaatacatt
gacatgtgccgtggtccacacgtaccccacatgggcttttgtcaaaactttaaattgctg
aacattgcaggtgcatactggcgtggtaacagcgataacaaaatgctgcagcgtatctac
ggtaccgcgttccatgataagaaagctctgcaagcgcatttaactcgccttgaagaagcc
gcaaaacgtgaccatcgtaaaatcggtaagcaacttgatctgttccatatgcagcaagaa
gcaccgggtatggtgttctggcaccacaatggttggtcaatcttccgtgatctggaaatc
tttattcgtcaaaaattgaacgaatacggttaccaagaagtaaaaggtccattgatgatg
gatcgcgtactttgggaacgttcaggtcactgggataaatacgctgatgcgatgttcacc
acttcatcagaaaaccgtgaatacgcgatcaagccgatgaactgtcctggtcacatccag
attttcaaccaaggtttgaaatcttaccgtgatctgccattgcgcatggctgagtttggt
tcctgtcatcgtaacgagccatcaggttcactacacggtatcatgcgtgtgcgtggcttt
actcaagatgacgcgcatatcttctgtactgaagatcaaattcaacaagaagtgacttcg
tgcatcaagatggtgtatgacacttacacgacttttggcttccaaaatatcgtggtgaag
ttgtctactcgccctgaaaagcgcgtgggtagcgatgaaatttgggacaaatcagaacaa
gcgctgatcgattctctgaaggcaatggacattccatttgaaattcaggaaggcgaaggt
gcgttctatggtccgaaaattgagtttacactctacgactgtttagatcgtgcgtggcaa
tgtggtacagtgcagctcgatttcaacttgcctacacgtttaggtgccacttacgttggt
gaaagcaatgaacgcttaattccggtgatgatccaccgtgcgattttgggttcacttgaa
cgctttatcggtattctgattgaagaatacgcaggattcttcccaacttggttggcgcca
gagcaggctgttgttgtaaatatcacggataaacaagccgactatgctcatgaagtcgct
caaaagctacaaaaatgtggcattcgagcaaaagcagacttgagaaatgagaaaataggc
tttaaaatccgcgaacacactttgaagcgtgttccgtacatgttggtttgtggcgaccaa
gagatggaagctggcgaaatcgcagtacgtacacgtaaaggtaaagatcttggtaaattt
aaattggatgattttattgcacatatccaagctgagattgcaagccgtaagcttaatctg
gaggaataa
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