Vibrio cholerae O1 El Tor FJ147: IR04_02990
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Entry
IR04_02990 CDS
T03827
Name
(GenBank) diguanylate cyclase
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
HK_sensor_dom_bact
PAS_9
PAS
PAS_4
PAS_3
dCache_1
PAS_8
GGDEF_GdpP
GGDEF_2
PAS_13
PAS_12
PG_binding_4
Motif
Other DBs
NCBI-ProteinID:
AJZ98195
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Position
II:609286..611169
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AA seq
627 aa
AA seq
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MYTSARKYFIQFAIVAFVLGFIPTLYFIHAASQLETQAVSSVEKQTRLQLEFSQHDLLRM
LESTHQATQLLAKNDLLFTAVTTPSKEALSQLKTLWDVTLRSQAIFSSFRLLDRQGKEQL
KAIYDGHQVTFVESAQTTDPFSQQIVAQYAQLTTPQVWATQVAMSADTPSGMLPTFRFVT
GIEHQGQRQGFLVVTVKLQSLYQRLSFIYDQFDSPDILNSAGELLLSEHKPSGTRSTSSL
HFSAQHPELWQKIQLNQQGFALSNQTWFSYIKVDLSSVLPDFKPLVLVLRINKAEIDKTY
ANARWALMSQAVTVLSLLSIIAAGFAAWNINHLKNSLDSKLARAAMDGMSAVVITDRQNR
IIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEFYMQMWKALQDNGVWEGEVINKRKD
GESITEILRIQSIRDEDNVIQFYVASFVDISHRKALENRLRELSEKDALTDLWNRRKFDQ
TISLECAKRRRYPDQAQSCLAIIDIDHFKRINDKFGHNEGDLVLRTVAKGIQDQLRESDF
IARIGGEEFAIIFPYTSIEEAEQVLNRVRLHIASLHHQQVTLSGGVTDVCTSPDQSYKRA
DLALYESKTSGRNQISVLTAMEMHHFA
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtacacctcagcccgtaaatatttcatacaatttgccattgttgcgtttgtacttggt
ttcattcctacactgtatttcatacatgctgctagccagcttgagactcaagcggtcagc
agcgttgaaaaacagactcgcttacagcttgagttcagtcagcatgacttgttacgaatg
ctggaaagcacacaccaagccacccagctgttagctaaaaatgaccttttattcacggct
gtcaccacaccaagcaaagaagcactcagtcaactcaaaacattgtgggatgtgacgtta
agatcgcaagcgattttctcttcattcagattgctggatagacaaggaaaagaacaactt
aaagcgatttacgatgggcaccaagtcacctttgttgaatctgctcaaacgacagatccg
ttcagccagcaaattgtggctcaatacgcccaactcacgacgcctcaagtttgggcaacg
caagtcgcgatgtcagcagatacgccttctggtatgctgccgacctttcgttttgtgacg
ggtattgagcatcaaggccaacggcaaggttttcttgtcgtgacggtgaagctacagtct
ctctatcaacgtctctcttttatttatgatcagtttgattcaccggatattttgaattcg
gcaggagaattactgctcagtgaacacaagccatccggtacacgttcaacctcttcactc
cacttttcagcccaacacccagagctttggcaaaaaatccaactcaaccaacaaggcttt
gctctatccaatcaaacctggtttagctatatcaaagtggatctcagttctgtcttacct
gactttaaacctttggtattggtactgcgcatcaataaggcagaaatagataagacctac
gcaaatgcgcgctgggcactgatgagtcaagcggtgacagtgttatcgctactctctatc
attgcggctggatttgcggcatggaacatcaaccatttaaaaaatagccttgacagtaaa
ttggctcgagcagcgatggatggcatgtcagcggtggtcattaccgaccgccagaatcgc
atcatcaaagtaaacaacgaatttacccgcctaagtggttacacttttgaagatgtcaaa
ggtaagcagccgtccatttttgcttctggattacacaaagtcgaattctatatgcagatg
tggaaagctctgcaagacaatggcgtatgggaaggtgaagtgatcaacaaacgcaaagat
ggcgaaagcatcaccgaaattctccgtattcaaagcatccgcgatgaagacaatgtcatt
caattctacgttgcctcttttgtggatatttcacatcgcaaggcgctggagaatcgcctg
cgtgagctgagcgaaaaagatgcgttaaccgatttgtggaatcgacgtaaattcgatcaa
accatctctttagagtgcgctaagcgtcgccgttatcccgatcaagcccagagctgcctt
gctatcattgatatcgaccactttaaacgcattaacgacaaattcggacacaacgaaggg
gacctagtgttacggaccgttgcgaaaggcatccaagatcagttacgggaatcggatttt
atcgcacggattggcggagaagagtttgccattattttcccctacacttccattgaagaa
gccgaacaagtacttaaccgcgtacgcctgcatatcgcttcattacaccatcaacaagtg
accctaagtggtggtgttaccgatgtttgcacatcacccgaccaaagctacaaaagagcc
gatctggctttatatgaatccaaaacatcgggacgcaaccaaatatcagtactcaccgcc
atggaaatgcatcactttgcgtga
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