Vibrio cholerae O1 El Tor FJ147: IR04_03340 Help Entry IR04_03340        CDS       T03827                                  Name (GenBank) DEAD/DEAH box helicase   KO K11927   ATP-dependent RNA helicase RhlE [EC:5.6.2.7] Organism vcf  Vibrio cholerae O1 El Tor FJ147 Pathway vcf03018   RNA degradation Brite KEGG Orthology (KO) [BR:vcf00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     IR04_03340  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vcf03019]     IR04_03340 Enzymes [BR:vcf01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      IR04_03340 Messenger RNA biogenesis [BR:vcf03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Helicases      IR04_03340 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C ResIII P-loop_SecA AAA_22 Helicase_C_2 Motif Other DBs NCBI-ProteinID:  AJZ98256 LinkDB All DBs Position II:complement(685584..686852) Genome browser AA seq 422 aa AA seqDB search MSELSITFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAF GLPLIQRFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTS MKVQLNHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVL RRLSPLRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKRE LLSYLIGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAG KVRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQ PQLEAIERLLNTRLPQEWLKGFEPSPVVHEENSPRRSAGRSSEKRKLKAQLKIHAQRGKK AR NT seq 1269 nt NT seq  +upstreamnt  +downstreamnt atgtcagaactctccatcactttttcgcaattaggcttggattctcgtctgctgaataca ttgagcgagcttgggatcgccaatcccacgccaatccaacagcaagctattcctcatgta ttgcaaggaaaagatgtactggcaggggcgcaaaccggaaccggtaaaacggcggcattt ggcttacctttgatccaacgctttattgagcagccttggcagcgtgaagcaaacagcaaa gagatccgggcgttagtgctggtgccaacgcgtgagttagctcagcaagtattggatagc ctacaagcctacgcgaaaggaacggagcttaagatcgtagccgtttatggcggcacgagc atgaaggtacagctcaatcatttgcgtggtggtgtggatattttgattgcgacgccgggg cgtttgctcgatcacgcccatgtgaaatcgctgtttttgggcaaagttgaagtgttggta ctcgatgaagcggatcgcatgctggatatgggctttatgccagatttgcagcgcgtgctg cgccgtttatcgccactgcgtcaaacgctgtttttctctgcaacgtttgatagcaaaatc aaagcggtggcgtatcgcatcatgcgtgatcctatcgaagtgcaggtgacgccatccaat tccacggcagaaaccgtgcagcagatggtgtatccggtggataaaaagcgcaaacgcgaa ctgctctcttatctgattggctcgaaaaattggcagcaagtgttggtgtttaccaaaacc cgtcaaggcagtgatgcacttgcggaagaactcaagttggatggtataaaagcggtgtcg attaatggcgataaaagccaaggtgcacgccaaaaggctttggatgattttaaagcaggc aaagtgcgtgctttgattgcgaccgatgtcgccgcacgtgggttagatattgcccagctt gagcaagtggtgaactacgatatgccatttaaagcggaagactatgtgcatcgtattggg cgtacgggacgcgcaggtttagcgggattggcggtctctttgctgtcgcatgatgaacag ccacaactcgaagcgattgagcgtttactcaatacacgtcttcctcaagaatggttgaaa ggttttgagcctagccctgtggtgcatgaggaaaattcaccgcgtcgctcggctggccgt tcgtcagaaaaacgcaaactaaaagcacaactgaaaatccatgcgcagcgcggtaaaaaa gcgcgttaa

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