Vibrio cholerae O1 El Tor FJ147: IR04_03530
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Entry
IR04_03530 CDS
T03827
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcf03400
]
IR04_03530
Enzymes [BR:
vcf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
IR04_03530
DNA repair and recombination proteins [BR:
vcf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
IR04_03530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AJZ98292
LinkDB
All DBs
Position
II:complement(727571..729121)
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AA seq
516 aa
AA seq
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MRYSVVRLILGDQLNHAHSWFSEHRDDVLYLIAELHQEQEYVRHHIQKQCAFFAAMQAFA
DYLSAEGHHVWHLDLDASAQYNDLPDLIAQICQQVQADAFQYQRPDEYRLLEQMANLRLS
GITIGCVDTEHFLLPFAEIPEQFPASKAVLMEHFYRRMRKRFGYLMTADGKPEGGQWNFD
ADNRNKLKSPDLLQLPTPLCFDNPVASIKARIERHRIPSIGQVGESLLWPINRAQALSLL
AHFCQICLPNFGRFQDAMTAQHPHRWSLYHSRLSFALNSKLLSPREVIEATISAYRAAQG
QISLAQVEGFVRQILGWREYVRGMYWSNMPHYQTRNHLGAQRPLPSYFWNGQTKMRCLQQ
AITQSLDFGYAHHIQRLMVTGNFALLTECDPDQVDAWYLGIYIDAIEWVELPNTRGMALF
ADGGLIATKPYSASGSYINKMSDYCASCAYQVKLKSGEKACPLNSLYWRFMLKHRDRLAN
NPRIGMLYKTWDKMTSDSQQAILSTADAYLSQIESL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgcgctattccgttgtgcgattgatattgggtgaccaactcaaccatgctcattcttgg
ttttctgagcatagggatgatgttttatacctgattgcagagctgcatcaggagcaggag
tacgttcgccatcacattcaaaagcagtgtgcattttttgcggccatgcaagcttttgct
gattatttaagtgcagaagggcatcacgtatggcatctggatctggatgccagcgcgcaa
tataacgatttacccgatctgatcgcgcagatttgccagcaagttcaggccgatgctttc
caataccaaagacctgacgagtatcgactgcttgagcaaatggccaatttgcgcctatcc
ggcatcacaatagggtgcgttgatactgagcacttcttgctaccgtttgcggagatccca
gagcaatttcccgcaagcaaagccgtgctgatggaacacttttatcgacgaatgcgtaag
cgttttggttatttgatgacggctgatggcaaacctgaaggtggacagtggaattttgat
gccgacaatcgtaataaactgaaatcgccagatcttcttcagttgccgacgccactctgt
tttgataatcccgttgcgtccatcaaggcgcgaatagaacgtcatcggattccgtctatc
ggacaagtcggagagtcactgctgtggcctatcaatcgtgcgcaagcgctttccttattg
gcgcatttttgccaaatttgcttgcctaattttggtcgctttcaagatgcgatgacggcg
cagcatccccatcgctggagcctgtatcacagccgactttcatttgcgctcaatagtaag
ctactttcacctcgcgaagtgattgaagctactattagtgcttatcgcgcagctcaaggg
cagatctcgttagctcaagtggaaggatttgtgcgacaaattctcggttggcgtgaatat
gtgcgcggcatgtattggagcaatatgcctcattaccaaacacgcaatcatttaggagcg
cagcggccgttaccaagctatttctggaatggacaaaccaagatgcgttgtttgcagcag
gcgatcactcagtcactggattttggctacgcgcatcatattcaacgcttgatggtgaca
gggaattttgccttgctgaccgagtgtgaccctgatcaagtcgatgcctggtatttaggt
atctatatcgatgcgattgaatgggtcgaacttcctaatacgcgaggtatggctctgttt
gcggatggcggattgatcgccaccaaaccctattcagccagtggttcctacatcaataaa
atgagtgactactgcgcctcttgtgcttatcaagtgaaactcaaatccggagagaaagcg
tgcccgctaaattcgctttactggcggtttatgcttaaacatcgtgatcgactcgccaac
aatcctcgcatcggaatgctatacaaaacgtgggacaagatgacgagcgattctcagcaa
gcgatcctgagcacggctgatgcgtatctgagccagattgaaagtttataa
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