Vibrio cholerae O1 El Tor FJ147: IR04_03965
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Entry
IR04_03965 CDS
T03827
Name
(GenBank) CdaR family transcriptional regulator
KO
K02647
carbohydrate diacid regulator
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcf03000
]
IR04_03965
Transcription factors [BR:
vcf03000
]
Prokaryotic type
Helix-turn-helix
Other families
IR04_03965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_8
DUF832
Motif
Other DBs
NCBI-ProteinID:
AJZ98377
LinkDB
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Position
II:complement(833805..834944)
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AA seq
379 aa
AA seq
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MILDSQLAQQIVDRTMAIIGYNINVMNQAGVIIGSGEKNRIGQVHDGAILALKHGDSVEL
TAESCVALKGVKPGINMVLRNQQQVVGIVGITGEPKDIRDFANLVKMSAEMIIEQAALVE
QLQWDRRHREEFISAWIHNTLSAAELDAWAARLSIDLSKPRVAVVIAFRQPKSGQSLDQI
RQVVELLEHPERDNLVAVVSMQEIVVLKPCRTPEHWTSEYESLRIDKLMARLKAYDITGY
DIALGQLFINPNAIHLSYQSAKQVLRIGQVRQPEKQKHLYEELRLPVLLLPLNEGWQGEQ
WRRVMQELQTQDKSGQLVKTLKGLFAANGNLNLCAQQLFIHRNTLRYRLEKITEITGIET
NSLLGLAELYIAYQLTSYD
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgatactggacagtcaattagcgcaacaaattgtcgatcgcaccatggcgatcatcggc
tacaacatcaatgtgatgaatcaagctggagtgatcattggcagtggcgagaaaaatcgg
attggccaagtgcatgatggtgcaattttggcactcaaacatggcgattcggtagagcta
acggcagaaagctgcgtggcactgaaaggtgtaaaaccaggcatcaacatggtgttgaga
aatcagcagcaagtggtcgggattgtggggattaccggagagccgaaagatattcgtgat
tttgccaatctggtcaaaatgagtgccgaaatgatcattgagcaagcagctttggtcgaa
caactacaatgggatcggcggcatcgtgaagagttcatttccgcttggatacacaatacc
ttatcggccgccgaacttgatgcatgggcggcgagactttccattgacctctctaagcct
cgcgtggcagtggtcatcgcctttcgtcaaccgaaaagtggacaaagcttggatcagatc
cgtcaagtggttgagcttttggagcaccctgaacgggacaatctggtcgctgtggtttct
atgcaagagatagtcgtgctcaaaccttgtcgaacaccagagcattggaccagcgaatac
gaaagtttgcggattgataagttgatggcgaggctcaaagcctatgacatcacaggatat
gacattgctttaggccagctttttatcaacccaaacgcgatccatctctcttaccaaagt
gccaagcaggtactgaggattggccaagtacgccagccagaaaaacagaaacatctctac
gaggaactgcgtttgccggtattgcttttgccattgaatgaaggatggcaaggtgaacag
tggcgacgagtcatgcaggagttgcagacacaggataagtcagggcaactcgtgaaaacg
ttaaagggactatttgcggcaaatggcaacttgaatctttgcgcccaacaactgtttatc
caccgaaatacgctgcgctatcgtttagaaaaaatcaccgaaattacagggattgagact
aactccttacttggtttggcggaattgtatattgcgtatcagctcacaagttatgattaa
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