Vibrio cholerae O1 El Tor FJ147: IR04_04290
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Entry
IR04_04290 CDS
T03827
Name
(GenBank) peptide ABC transporter ATPase
KO
K10823
oligopeptide transport system ATP-binding protein
K15583
oligopeptide transport system ATP-binding protein
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf01501
beta-Lactam resistance
vcf02010
ABC transporters
vcf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IR04_04290
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IR04_04290
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IR04_04290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcf02000
]
IR04_04290
Transporters [BR:
vcf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
IR04_04290
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
oligo_HPY
AAA_21
AAA_29
AAA_22
AAA_16
nSTAND1
FtsK_SpoIIIE
RsgA_GTPase
MMR_HSR1
Mg_chelatase
AAA_23
nSTAND3
DUF87
DUF2813
DUF5906
AAA_13
AAA_7
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
AJZ98439
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Position
II:899026..900645
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AA seq
539 aa
AA seq
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MSPNPLLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLL
PKNARIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAI
RCHRNVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILI
ADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQG
STEQLFLQPEHDYTRMLINSIPKGSKDPVAVDAAPLLKAEDIRVKFLVKPYFISRRNQYF
EAVKGISLELKQGETLGIVGESGSGKSTLGRALIGLLPSTGQIAFKGQDFRALSEKQRLA
LKKDIQMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKLERMQRARRALEEVRLDPNSI
NRYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIELLKEIQKRRNIGY
LFISHDLAVVKALSDRVLVMQKGQVMEQGSAESIFHNPQHEYTKKLIAASFDILEENAA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtcacccaatccacttttgcaagttcgtaatttaagcgtgagctttaccaccaatgat
ggtgttgtcgatgcggtaaaaaacgtcagctttgacattcgccccggagaaacccttgcg
attgtcggtgagtccggtagtggtaaatcggtttcgaccaacgccttgatgcaactgctg
cctaaaaacgcgcggatccatccagaatcgagcatcatgtttgaaggtgaagagctgctc
aataaaacggacacgcagatgcgccgcatccgtggggatcggattggcatgatcttccaa
gagccgatgacttcactcaatccctatatgcgtgttggcgttcaagttgctgaagctatt
cgttgccaccgtaatgtcagccagaatcaagcgaaacagcgagtcttggagctgtttcag
ctcgttcatctgcccgaccccaaaggcgcttaccaaaaattcccgcatgagttttccggc
ggtcagttacagcgcattatgattgcgatggcactgatcaatgagccggatattttgatc
gccgatgaaccgaccacggcgctcgatgtcacagttcaagccgaagtgctccgactcatc
aaagagatccaagccaatatgggcatggcgattttgtttatcacccacgatttaggtgtg
gtgaaatttgttgccgaccgcgtgctggtaatgtgtaaaggggatgtggtagagcaaggc
tctactgaacagcttttcctgcaacctgagcatgattacacacgcatgctgattaactcg
atacccaaaggcagtaaagacccagttgctgtcgatgcagcaccactgctcaaagccgaa
gatattcgagtcaagtttctggttaaaccgtactttatcagtcgtcgtaatcagtacttt
gaagcagtgaaagggatttctcttgaactcaagcaaggtgaaactctcggtatcgtaggc
gaatctggcagcggaaaatccacattagggcgagctttgattggtttactgccttccacg
ggtcagattgccttcaaagggcaagactttcgcgctttgagcgagaaacagcgcttagcc
ctgaagaaagacattcagatggtgtttcaagacccttatggctcgctttctccacgtatg
accgttggcgaaatcatcactgaagggcttttggttcaccaacctcacatcagtaagttg
gaacgtatgcaacgggcgagacgagcgctcgaagaagtgcgattagatccgaattcgatt
aatcgttacccacatgagttctccggtggtcaacgtcagcggattgcgattgctcgggcg
ctaattctggaaccttcctttattttattggatgagcccacttcagcgctggatcgctcc
gtacaactgacggtcattgaactgctaaaagagattcaaaaacgacgcaacatcggctat
ctgttcatcagccacgatcttgccgtggtaaaagcgttatcggatcgcgtgttggtaatg
caaaaagggcaagtgatggaacaaggcagtgcggaatccatcttccataatccacaacat
gaatacaccaaaaaactgatcgctgcttctttcgacattctggaagaaaatgcagcatga
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