Vibrio cholerae O1 El Tor FJ147: IR04_04550
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Entry
IR04_04550 CDS
T03827
Name
(GenBank) sugar ABC transporter substrate-binding protein
KO
K10117
raffinose/stachyose/melibiose transport system substrate-binding protein
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IR04_04550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcf02000
]
IR04_04550
Transporters [BR:
vcf02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Raffinose/stachyose/melibiose transporter
IR04_04550
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Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
SBP_bac_11
Uteroglobin
Motif
Other DBs
NCBI-ProteinID:
AJZ98488
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All DBs
Position
II:complement(956758..958134)
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AA seq
458 aa
AA seq
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MTNKWIGALGLLLSGQLMASELVIESWRADDKALWEQKIIPAFEAANPGIKVKFNPVPNV
NYTPTLWENLKAGKAGDLITCRPFDDSLALFKAGHLAEITEMAGMENFPSFAQAPWQTDS
GAQTFCVPMASVIHGFFYNKKIFNELGLSVPQTREQFFTVLDKVKADGRYIPLSMSGSES
WVASELGYQNIGPNYWKGEDGRLALINGQEHLDDSQYVKVFEELARWRAYLGEDGELRDY
GTSNELFTSGKAALYVAGSWEIAPFTDKVDFGVMRPPVAKQGDGCFFTDHTDIGMGMNPA
SKNPQAAMAFLQWLTTPEFAELYTNSLPGFFSLSNHFFDVTNPAAREMMEWRDQCDSTIR
VATQILSRGQPKLGDELAEVSQAVLVGKMTPTAAAERLEQGLKRWYAPHQTRKAKEQECQ
CVEPISPTTRLNTLPVVDIAPVVASDPVPPTEATILSE
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacaagtggattggagctctaggtctcctactatcgggtcagttgatggccagc
gaattggtgattgaaagttggcgcgccgatgataaggcgctgtgggagcaaaaaatcatc
cccgcttttgaagctgcgaatcctggcatcaaagtgaaatttaacccagtgccgaatgtg
aactatacgccaacgttgtgggaaaacttaaaagctggaaaagcgggagatttgatcact
tgccgcccgtttgatgattctttggcacttttcaaagccgggcacttggcagaaatcacc
gaaatggctgggatggaaaatttcccgagctttgcccaagcgccttggcaaaccgattct
ggggcacaaaccttctgtgtccctatggcttcagtgatacatggttttttctataataag
aaaattttcaatgagttagggttgagtgtgccgcaaacccgtgaacagttttttaccgtt
ctcgataaagtgaaagcggatggacgttatatccccttatcgatgagtggttctgaaagc
tgggtcgcatctgaattgggctatcaaaatatcggccccaattattggaaaggggaagat
ggtcgtttggctttgattaatggccaagagcatttggacgattcacagtacgtgaaggtg
tttgaagagctagcgcgttggcgagcctatttaggtgaggacggtgagctgagggattat
ggcaccagtaatgagctctttacctcgggtaaagccgcgctttatgtggcgggttcgtgg
gaaattgcaccatttaccgataaagtcgattttggcgttatgcgccctcctgtcgcaaag
caaggggatggctgtttctttactgaccacactgacatcggtatggggatgaacccggcc
agcaaaaatccgcaagcagcgatggcctttttacaatggttaaccacaccagagtttgct
gagttgtataccaattcgctaccggggtttttctcgttgtctaaccacttctttgacgtc
accaatcctgcggcgcgtgaaatgatggagtggcgcgatcaatgtgactcaaccattcgg
gtcgcaacgcaaattctttcgcgtggtcaacctaagttaggtgatgagcttgccgaagtg
agccaagcggtattggttggcaaaatgacaccaaccgctgcggcagagcgcctagagcaa
ggtttaaaacgctggtacgctccccatcaaactcgtaaagcgaaagaacaagagtgtcaa
tgtgttgagcccatatctccgacgacgcgcctaaatacacttcctgttgttgatattgct
cctgtcgttgcaagcgatcctgtacccccaacggaggccacaatattgtcggaataa
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