Vibrio cholerae O1 El Tor FJ147: IR04_04710
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Entry
IR04_04710 CDS
T03827
Name
(GenBank) AsnC family transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcf03000
]
IR04_04710
03036 Chromosome and associated proteins [BR:
vcf03036
]
IR04_04710
Transcription factors [BR:
vcf03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
IR04_04710
Chromosome and associated proteins [BR:
vcf03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
IR04_04710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
MarR
MarR_2
HTH_34
HTH_20
Fe_dep_repress
LexA_DNA_bind
E3_UFM1_ligase
DDRGK
HTH_IclR
HTH_27
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
AJZ98518
LinkDB
All DBs
Position
II:complement(992082..992564)
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AA seq
160 aa
AA seq
DB search
MSLDRVDRDILRILHAKGRLPVVELAKLVNLTTSPCSERVKRLEKEGYIRGYHADLDPGK
LGLDVQVFIHIRLDQSSFSIFERFAHAVADIPEIEACYSLSGDFDTMIKVRVKDMKAYQA
FMSGKLGSLPGVIQTRSEFVIEEHKTSFGINPELIYSLPS
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggatcgagttgaccgcgatattttgcggatcttacatgccaaagggcgttta
ccggtcgttgagctggccaagttggtgaatctcacgacatcgccctgttcagagcgggta
aaacgtttagaaaaagagggatacattcgcggttaccacgcggatctcgatccgggaaag
ttaggcttggatgtgcaggtctttatccatattcggcttgatcaaagcagcttctcaatt
tttgaacgttttgctcatgctgttgcggatatcccagaaatcgaagcctgttactcgctc
tctggtgattttgacaccatgattaaagtgcgcgtcaaagacatgaaagcgtatcaagcg
tttatgtcgggcaagttgggctctttacccggcgtgattcaaacccgtagtgagtttgtg
attgaagagcacaaaaccagttttggtatcaaccctgagctgatttacagcttgccaagt
taa
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integrated database retrieval system
