Vibrio cholerae O1 El Tor FJ147: IR04_04880
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Entry
IR04_04880 CDS
T03827
Name
(GenBank) histidine kinase
KO
K07645
two-component system, OmpR family, sensor histidine kinase QseC [EC:
2.7.13.3
]
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf02020
Two-component system
vcf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IR04_04880
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IR04_04880
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vcf01001
]
IR04_04880
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vcf02022
]
IR04_04880
Enzymes [BR:
vcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
IR04_04880
Protein kinases [BR:
vcf01001
]
Histidine kinases
OmpR family
IR04_04880
Two-component system [BR:
vcf02022
]
OmpR family
QseC-QseB (quorum sensing)
IR04_04880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
2CSK_N
HATPase_c_2
HATPase_c_5
fvmX5
Motif
Other DBs
NCBI-ProteinID:
AJZ98549
LinkDB
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Position
II:complement(1034248..1035591)
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AA seq
447 aa
AA seq
DB search
MLVSFGFSYSNAQHEVGEVYDARLGQSAKLLLIATSVSANEFADRNQHEQFNLWMQHIQR
LSKANDDVATLFGHPYEQYLLFQFYREGDLLFSSDTHLPALSLGRDANGFSDITLNGESW
RYFQLSLPDQEKGKQYVLVAEKQSIRDEAINEIALSTALPQLILILCLIVVLVVLIERSF
QPIQALKAAIALRSIHKLDRIYVEKPTVELLPLVETLNQLLNELEQAWQREKRFTRMAAH
ELKTPLTVLRVNAENALRSTNQEQLKQDLERIFKGIERTDRLIHQLLMLAKVESTQTLRK
QPVELANVIKQVIADLAPIAFKQDQQLSFHGESSRLWGDELLLGILFKNLLDNAIRYSGH
SSQIAVELSDHDGEIEVRVSDTGAAIDDLTREKMFDNFYRANSQKGDGAGLGMSICRDIA
ALHGGQVLLLPRTDERNTFVVRFRNCE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgctggtctcgtttgggttcagttattccaacgcccaacatgaagtgggagaagtgtac
gatgcccgtcttgggcagtccgccaaattattactgatcgccacttctgtttcggccaat
gaatttgcagatcgtaatcagcatgagcagttcaatctgtggatgcagcatattcagcgc
ctttccaaagccaacgatgatgtcgccacgctctttggccacccgtatgaacagtattta
ttattccagttttatcgagagggcgatcttctctttagctctgatactcatttgcctgcg
ctgagtcttggccgtgatgcgaatggttttagtgatatcacgctcaacggcgaaagctgg
cgttatttccagttgagtctccctgatcaagaaaagggtaaacagtatgttttggttgca
gaaaagcaaagcattcgtgatgaagcgattaatgagatcgccttatccaccgcacttccg
caattaattttaattctgtgcttgattgtggttttggtggtgctgattgaacgtagcttt
cagccaatccaagcgctgaaagcagcgattgctctgcgcagcatccataagctagatcga
atttatgtcgaaaaacctacggtggaacttttgcctttggtggagacgttgaatcaactg
ctcaatgagctagagcaagcatggcagcgtgagaaacgttttactcgaatggcggcacat
gagttaaaaaccccgctgaccgttttaagagtgaatgccgaaaatgccctgcgtagcacc
aatcaggaacagttaaagcaagatttagaacgtattttcaaaggtatagagcgcaccgat
agattgattcatcagctcttaatgctggccaaagtagaaagtacacaaaccttaaggaaa
cagccggttgagctggcaaacgtcattaaacaagtgatagcggatttagcacctatcgct
tttaagcaggatcagcagctgagttttcatggcgaaagttcgcgtttatggggagatgag
ttactcctgggcattttatttaaaaatctgctggataatgccattcgttattccggccac
tctagccagatagcggtagagcttagcgaccacgatggtgagattgaagtgcgtgtgtcg
gatactggggccgcgattgacgatctgactcgtgaaaaaatgtttgataacttctaccgt
gccaacagccaaaaaggcgatggcgcagggcttggcatgtcgatctgtcgtgatattgca
gcgcttcatggcggtcaagtgctcttgctgccacgtactgatgagcgtaatacctttgtt
gttcgttttcgcaattgcgaataa
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