Vibrio cholerae O1 El Tor FJ147: IR04_04885
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Entry
IR04_04885 CDS
T03827
Name
(GenBank) XRE family transcriptional regulator
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf02020
Two-component system
vcf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IR04_04885
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IR04_04885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vcf02022
]
IR04_04885
Two-component system [BR:
vcf02022
]
OmpR family
QseC-QseB (quorum sensing)
IR04_04885
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Ortholog
Paralog
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Motif
Pfam:
Response_reg
Trans_reg_C
OKR_DC_1_N
KaiA_N
Nup96
Motif
Other DBs
NCBI-ProteinID:
AJZ98550
LinkDB
All DBs
Position
II:complement(1035653..1036309)
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AA seq
218 aa
AA seq
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MRLLLVEDDTLLGESMQVALSRQGYTVDWLERGGGVVTALKTEQFTALILDLTLPDMDGL
EVLRQIRRAGYTLPVMILTARDDISDRVKGLDGGADEYIGKPFALEELLARLRLIIRRSS
GSAEELISVGELDLSLSKQEIYYAQQALKLTRNEYKILASLMTQAGRVMSKELLQQALHG
WDEGSSDNAIEVHIHNLRKKLPDNLVKNVRGVGYMIEK
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttactattagttgaagatgacacgttgctcggtgaatcaatgcaagtagcgtta
agccgacaaggctatacggttgactggctggagcggggtggtggcgtcgtgaccgccctg
aaaaccgagcaatttacggcactgattttggacctcaccttgccagatatggatggcttg
gaagtcctgcgccaaattcggcgagcgggttatacattgcctgtcatgatactcacggca
cgggatgatatcagtgatcgggtcaaagggttggatggcggtgcagatgagtacataggt
aagccgtttgcgctcgaagagctgctcgcacgtttacgcttgatcattcgtcgtagctca
gggagcgcagaggagctcatctccgttggggaacttgacctttcgctctctaaacaagaa
atctactacgctcagcaagctctgaaattaacgcgaaatgagtacaaaatcctcgccagt
ttgatgacccaagcgggaagagtgatgagtaaagagcttttgcagcaagcactgcacggc
tgggatgaaggcagcagtgataacgcaatcgaagtacatattcataatctgcgcaaaaaa
ttgccggataatctggttaaaaatgtacgaggtgtggggtacatgattgaaaaataa
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