Vibrio cholerae O1 El Tor FJ147: IR04_05485
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Entry
IR04_05485 CDS
T03827
Name
(GenBank) coproporphyrinogen III oxidase
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf00860
Porphyrin metabolism
vcf01100
Metabolic pathways
vcf01110
Biosynthesis of secondary metabolites
vcf01240
Biosynthesis of cofactors
Module
vcf_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
IR04_05485
Enzymes [BR:
vcf01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
IR04_05485
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
HemN_C
TPR_21
Motif
Other DBs
NCBI-ProteinID:
AJZ98659
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Position
I:110108..111496
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AA seq
462 aa
AA seq
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MSSYVVPSQQIVWDQAILDKYNYSGPRYTSYPTAVEFHEAFTIADFDMACTQYPERPLSL
YIHIPFCHKLCYYCGCNKVITRHSHKADEYLDVLEHEIRQRASLLIGRNVTQLHFGGGTP
TFLTNAQISRLMTLLHSEFHFADEAEISIEIDPREIQLEVLDHLRQEGFNRVSIGVQDFN
KEVQKLVNREQDEQFIFDLVERAKQLGFRSTNLDLIYGLPKQTAVTFAQTLQQVLTMQPG
RLSVFNYAHMPQLFAAQRKIKEADLPAAEEKLAILQQTITTLTGAGYQFIGMDHFALPDD
ELAIAQRSGILHRNFQGYTTQGECDLVGFGVSAISMVGDAYAQNQKELKKYYAQVNEMRH
ALWKGVTLDKDDLLRREVIKQLICNFKLDKTAIEREFNLRFNHYFRQDLALLQTFIDDGL
VTVDERMIEVTLRGRLLIRNICMCFDKYLRERARQQQFSRVI
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtatgtcgtacccagccaacagatcgtatgggatcaggccattctggataag
tacaactactccggtccgcgttacacttcatacccgactgcggttgagttccatgaagcc
tttaccatcgctgactttgatatggcctgtactcagtacccagagcgaccattatcgctg
tacattcatatcccgttttgccataagctttgttactactgtggttgtaacaaggtgatc
actcgtcattcgcacaaagcggatgagtaccttgatgtgcttgagcatgaaattcgtcaa
cgcgcctcactattaatcggaagaaacgtcactcaactccacttcggtggtggtacgccg
acgttcttgaccaacgctcaaatcagtcgtttgatgacgctgctgcatagcgagtttcac
ttcgccgatgaggcggaaatcagtattgaaatcgatccgcgtgaaatccagttagaggtg
cttgatcacctgcgccaagaaggctttaaccgagtcagcatcggggtgcaggatttcaat
aaagaagtgcagaagctggttaaccgtgagcaagatgagcagttcatttttgatctggtt
gaacgcgctaaacagctgggttttcgttcgaccaaccttgacctcatttacggcttacct
aagcaaaccgcagtaacctttgcccagacgttgcaacaagtgctgaccatgcaaccgggg
cgtttgtcggtatttaactacgcgcacatgccgcaactgttcgcagcgcagcgcaaaatt
aaagaagccgatttacctgccgccgaagaaaaactggcgattttacagcagacaatcacc
acgctaacaggcgcggggtatcagttcatcggtatggatcactttgccttgccggatgat
gagctagcgattgctcagcgcagtggtatcttgcaccgtaacttccaaggctataccacc
caaggtgaatgtgacttagtcggctttggggtttcggcgatttccatggtgggcgatgcc
tatgcacaaaaccagaaagagctgaaaaaatactatgcgcaagtcaatgagatgcgtcat
gccttgtggaaaggtgtgacactagataaggatgatttactgcgccgtgaagtgattaag
cagctgatttgtaatttcaagcttgataaaacagcgattgagcgtgagtttaatctgcgt
ttcaatcactacttccgccaagatttagctctgctacaaacctttatcgacgatgggttg
gtgacggtggatgaacgcatgattgaagtgacgctgcgtgggcgtttgttaattcgcaac
atctgtatgtgttttgataaatacttgcgtgagcgggcgcgtcagcagcagttctcgcga
gtcatttaa
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