Vibrio cholerae O1 El Tor FJ147: IR04_05645
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Entry
IR04_05645 CDS
T03827
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcf03021
]
IR04_05645
Transcription machinery [BR:
vcf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IR04_05645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
HTH_25
UCR_14kD
HTH_10
ORF6N
VpsR
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
AJZ98688
LinkDB
All DBs
Position
I:140007..140867
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AA seq
286 aa
AA seq
DB search
MTNQAYPMALVSQDSLDSYIRSVNGYPMLSADEERELAERLHYKGDIDAAKGLILSHLRF
VVHVARGYSGYGLPMADLVQEGNIGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEYVLRN
WRIVKIATTKAQRKLFFNLRKSKKRLGWFNNGEVETVARELGVEPAEVREMESRLAAQDA
AFEMSAEDDENGMAYTAPVLYLEDKHSDLADNLEAENWEAHTTQRLSMALASLDERSQHI
VRARWLDDDNKTTLQDLAEMYGVSAERIRQLEKNAMRKLKEAVGEF
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgactaaccaagcgtatccaatggctcttgtttcccaagacagcttagatagctacatc
cgttcagtaaacggttacccgatgctgagtgctgatgaagagcgcgagctggcagagcga
ttacattacaaaggggatatcgatgctgcgaaaggcttgatcttgtcgcacctacgattt
gttgttcacgttgctcgtggttattccggttatggcttgccaatggcggacttagtgcaa
gagggcaatatcggtctgatgaaagcggttaaacgctttaaccctgagatgggggtaaga
ctggtgtcgtttgcggtgcactggattaaagccgaaattcatgaatatgtgctacgtaac
tggcgtattgtgaaaatcgccaccaccaaagcacagcgcaaactgttctttaatctgcgt
aaatcgaaaaaacgccttggctggtttaataacggcgaagtcgaaacggtagcgcgcgag
ctgggtgttgagcctgctgaagtgcgtgaaatggaatctcgtctggcagcccaagatgct
gcgtttgagatgtccgccgaggatgacgaaaacggcatggcctacactgcgcctgtgctg
tacctcgaagataagcactctgacttagctgataacctagaagccgaaaactgggaagcg
cataccacacagcgcctcagcatggcgctggcaagtcttgatgagcgtagccaacacatt
gtgcgtgctcgttggttggatgatgacaacaaaaccacactgcaagatttggcggaaatg
tatggtgtttctgcggagcgtattcgtcagcttgagaaaaacgccatgcgtaagctgaaa
gaagcggtgggcgagttctga
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