Vibrio cholerae O1 El Tor FJ147: IR04_06350
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Entry
IR04_06350 CDS
T03827
Name
(GenBank) transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcf03000
]
IR04_06350
Transcription factors [BR:
vcf03000
]
Prokaryotic type
Helix-turn-helix
LacI family
IR04_06350
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
Peripla_BP_4
LacI
HTH_10
HTH_24
HTH_23
HTH_IclR
HTH_3
Sigma70_r4
DUF2937
HTH_7
HTH_Tnp_ISL3
Hpr_kinase_N
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AJZ98814
LinkDB
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Position
I:complement(297495..298493)
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AA seq
332 aa
AA seq
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MTKKQRATLQDVADQVGVTKMTVSRYLRSPDSVAAATREKIALAVEALGYIENRAPAMLS
KSSSKAIGILLPSLSNQIFASFVQGIEAVTKANGYETLLAHFGYDEEEEERKIASLLAYQ
VDGLILTESHHTQRTLQMIASSGVPVVETMELPANPIDMAVGMDHVEASYQAVKKIIAAG
KRSIAYFGTRLDTRTKLRMQGYDQAMQEAGLPIKHVLTGSHSSFSLAAQLLDEAFARYPD
LDGVFCTNDDIAIGTLLVAQQRGIRVPEQLSVIGYNALDIGRTITPKLTSVDSPRYAIGE
KSAELLIAALKGERAEQQVVDMGYRFTAGESV
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaacagcgcgcgacattgcaagatgtggcggatcaagttggcgtaacaaaa
atgactgtgtcgcgttatctgagaagcccggattcagtggctgcggccacgcgggagaag
atagcgctcgccgttgaggctttgggatacattgaaaatcgcgcccctgcgatgctttct
aaatcatccagtaaggcgattggtattttacttccttccttgtcgaaccaaatttttgcc
tcttttgtgcaagggattgaagcggtgaccaaagccaatggctatgaaaccctactcgcc
cactttggttacgatgaggaggaagaagagcgcaaaattgcttcgctgctcgcgtatcaa
gtcgatggtcttattctcaccgaaagtcatcacactcagcgcactttgcaaatgattgcc
agctctggagtgcccgtggtcgaaaccatggagcttcccgccaacccaattgacatggca
gtaggcatggatcacgttgaagcctcatatcaagcggtgaaaaaaattatcgcggcgggt
aaacgttcgattgcctatttcggtacacggcttgatacccgcaccaaactgcgtatgcag
ggctatgaccaagcgatgcaagaagccgggctgcctatcaagcacgtgctgactggctca
cactccagtttctctctcgccgctcagttgcttgatgaagccttcgcgcgttaccccgat
ctggatggtgtgttctgcaccaacgatgacatcgcgattggtactctactggtggcgcag
cagcgtggtattcgggtgccagaacagctttcagtgattggctataacgcgctggacatc
ggccgcaccatcacgccaaagctgactagcgttgattcgccacgttatgcgattggagaa
aaaagcgctgagctactgattgccgcactcaaaggtgaacgtgccgagcagcaagtcgtc
gatatgggctatcgatttactgccggtgagagtgtgtaa
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