Vibrio cholerae O1 El Tor FJ147: IR04_06625
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Entry
IR04_06625 CDS
T03827
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
IR04_06625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcf03019
]
IR04_06625
03009 Ribosome biogenesis [BR:
vcf03009
]
IR04_06625
Messenger RNA biogenesis [BR:
vcf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IR04_06625
Ribosome biogenesis [BR:
vcf03009
]
Eukaryotic type
Pre-60S particles
RNases
IR04_06625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AJZ98859
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All DBs
Position
I:359901..360446
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AA seq
181 aa
AA seq
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MSFSDQNLIWIDLEMTGLDPEMHKIIEMATIVTDSELNILAEGPVIAIHQPESELAKMDE
WCTTTHTASGLVARVRQSQVSEEEAIDQTLAFLKQWVPEGKSPICGNSIGQDRRFLYKHM
PRLEAYFHYRYIDVSTIKELTRRWQPEVLKEFSKTGSHLALDDIRESIAELQFYRKAVFK
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcagcgaccagaatctgatttggattgatttagagatgacgggacttgatcct
gaaatgcacaaaatcattgagatggcgaccattgttactgacagtgagctaaacatttta
gctgaaggcccagtgattgcgattcatcaacccgaatccgaactcgcgaaaatggatgaa
tggtgtaccacaacgcacaccgcaagtggcttggtggcgcgtgtacgtcaaagccaagtg
agtgaagaagaagccatagatcaaacgctcgcgtttttaaagcagtgggtgccggaaggc
aaatctccgatttgtggcaacagtattggtcaagacagacgtttcctttacaaacacatg
ccgcgtttggaagcgtacttccattatcgttatattgatgtcagcaccatcaaagagctg
actcgccgctggcagcctgaagtgctaaaagagttcagtaaaacaggtagccatcttgct
ttggatgatattcgagagtcaattgctgagcttcagttctatcgtaaggcggtattcaag
atctaa
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