KEGG   Vibrio cholerae O1 El Tor FJ147: IR04_07780
Entry
IR04_07780        CDS       T03827                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
vcf  Vibrio cholerae O1 El Tor FJ147
Pathway
vcf02024  Quorum sensing
vcf03060  Protein export
vcf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vcf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    IR04_07780
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    IR04_07780
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    IR04_07780
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vcf02044]
    IR04_07780
Enzymes [BR:vcf01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     IR04_07780
Secretion system [BR:vcf02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   IR04_07780
  Eukaryotic Sec-SRP protein
   IR04_07780
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 Zeta_toxin cobW AAA_30 KTI12 T2SSE AAA_31 AAA_24 AAA_33 AAA_19 Mg_chelatase Helicase_RecD AAA_18 GlnD_UR_UTase APS_kinase AAA_16 AAA_14 ATP_bind_1 YqeC KAP_NTPase DUF3867 Rad17 TsaE Thymidylate_kin
Other DBs
NCBI-ProteinID: AJZ99046
LinkDB
Position
I:580264..581649
AA seq 461 aa
MFENLTDRLSKTLKNISGKGRLTEDNIKDTLREVRMALLEADVALPVVRDFVNRVKEGAV
GVEVSKSLTPGQEFIKIVRQQLEAVMGESNEALNLAAQPPAVILMAGLQGAGKTTSVGKL
SKLLKERDKKKVLVVSADVYRPAAIKQLETLANDLGVDFFPSTPDQKPIDIANAAIDHAK
KKFYDVLIVDTAGRLAIDEQMMAEIQALHKAINPVETLFVVDAMTGQDAADTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRHITGKPIKFIGVGEKTDALEPFHPDRIASRILGMGDV
LSLIEDLQRNVDQEKAEKLAKKFKEKKGFDLEDFREQLGQMKNMGGMMGMLDKLPGMSQL
PADMKDKVDDRVFKQMEAIINSMTMKERQNPDLIKGSRKKRIAAGSGTQVQDVNRLLKQF
TQMQKMMKKMQQGGMKGMMRNMQGLMGGGGRGGFGGGFFGR
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgtttgagaatttaaccgatcgattgtccaaaacgctgaaaaatatcagcggcaaaggt
cgtcttactgaagacaacattaaagataccctgcgcgaagtgcgcatggcgctgttagag
gcggacgttgcgctgcctgtcgttcgtgatttcgtcaatcgcgttaaagaaggcgcggtg
ggggtcgaggtttccaaatctctgactccgggtcaagagttcatcaaaatcgtccgccag
caacttgaagctgtgatgggcgaatccaacgaagcgttgaatcttgccgctcagcctcca
gcggttattttgatggctggtttgcaaggtgcgggtaaaaccacatccgtaggcaaactc
tctaagctcctaaaagagcgtgataagaagaaagtgttggtggtttccgccgacgtgtat
cgcccagcggcgatcaagcagctcgaaacattagccaatgatttaggcgttgatttcttc
ccgtccacaccggatcaaaaaccgattgatatcgctaacgctgcaattgatcacgctaag
aagaaattctacgacgtactgattgtcgataccgcaggtcgtttggcgattgatgagcag
atgatggcggagatccaagcgctgcataaagcgatcaatccggttgaaaccctgttcgtg
gtcgatgccatgacgggtcaagatgccgccgataccgcgaaagcgtttggtgatgcattg
ccactgaccggggtgattctaaccaaggtcgatggtgatgcccgtggcggtgcggcgttg
tcggtacgccatattaccggtaaaccgattaaatttatcggtgtcggcgagaaaaccgat
gccttagagcctttccatccggatcgtattgcttcacgcattcttggtatgggcgatgta
ctgtcgctgatcgaagatctgcagcgcaatgttgaccaagagaaagccgaaaaactcgcg
aaaaaattcaaagagaagaaaggctttgatttagaagactttcgtgagcagttaggtcag
atgaaaaacatgggcggcatgatggggatgctcgataaactgcccggaatgtctcaactg
cctgcggatatgaaagacaaagtggatgatcgcgttttcaaacagatggaagccatcatc
aactcaatgaccatgaaagagcgtcaaaacccagacctcatcaaaggctcacgcaaaaag
cggattgctgcgggttccggtacccaagtgcaagacgtaaaccgcctgctcaagcaattt
acccagatgcagaagatgatgaagaaaatgcaacaaggtggcatgaaaggcatgatgcgt
aacatgcaaggcctgatgggcggcggtggccgtggtggtttcggcggcggtttcttcggt
cgttaa

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