Vibrio cholerae O1 El Tor FJ147: IR04_07960
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Entry
IR04_07960 CDS
T03827
Name
(GenBank) peptidase
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf00550
Peptidoglycan biosynthesis
vcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IR04_07960
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vcf01003
]
IR04_07960
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vcf01011
]
IR04_07960
Enzymes [BR:
vcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
IR04_07960
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
IR04_07960
Glycosyltransferases [BR:
vcf01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
IR04_07960
Peptidoglycan biosynthesis and degradation proteins [BR:
vcf01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
IR04_07960
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AJZ99080
LinkDB
All DBs
Position
I:614364..616697
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AA seq
777 aa
AA seq
DB search
MTRKSSNRSRGRKARSGKSASSSKLQIWLGRIWSIGWKLALTLAAVLVFIGIYLDSMIKQ
RFEGQLFDLPTVVYARILTLEPGNGLSLQELRNELDVLNYRKVAQPRFPGEYASSSSRIE
LIRRPFEFADGPEPDRRVMLTFDGSGLNKIESLEQKRELGYLRLEPKLMGMLEKDSPEQR
LFLRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGRTVQGGSTLTQQLA
KNIFLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSGADAIHGFGLASRL
YFGQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRDLVLKLMMEHDILTAPEYQQ
AVTRPLDVQKTAQIASRQPAYFQQVSIELKEKLGDKFKADSGLRVFTSLDPVSQSKLEQA
IHDQIPQLAKTAGKDLEAAAIAVDRHSGEIRAMVGGKRTGYDGFNRVLNASRQIGSLVKP
AVYLTALAHPDQYNLATTLEDKPLTLKGSEGSAWTPRNYDRQYRGEVPLYLALAQSLNVP
TVALGMKLGIDQVSATLGKLGVNRDEIRPVPSMLLGSFSLTPYQVAQMYQTLTNSGKKAP
LSALRSVLDLEGNVLYESLPRVSQAVDQQAAWLTTYAMKQGVQEGTGRYLNAQFSSAALA
GKTGTTNDNRDSWFVGVDGREVTTIWLGRDDNQPTKLTGASGALRVYAQYLKYRIPEKLQ
LPWPEGITTFGFAKQTQGGLKLDCDNAFKLPIWDNQQQLKQQCENRPTEWIKKLFEW
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgacgagaaaaagtagtaacagatcgcgtggccgtaaagcgcgcagtggtaaaagtgcc
tcttcctccaagctgcaaatctggctgggaaggatttggagtatcggctggaaattagcg
ctgacgctggccgcagtgctggtttttattggtatctatctcgattcgatgatcaaacag
cgctttgaaggtcagctgtttgatctgccgaccgtggtctatgcccgtattttaacgctt
gagcccggcaacggcctcagtttgcaagaactgcgcaatgagctggatgtcctcaattac
cgcaaagtggcacagccccgtttccccggtgaatacgcgtcttcttccagtcgaattgag
ctgatccgccgtccgtttgaattcgcggatggtccagagccggatcgccgagtgatgctt
acctttgatggcagtggtttgaacaaaatcgaatcattagagcaaaaacgcgagctaggc
tacctgcgtttagagccaaaactgatgggcatgctggaaaaagattcgccggagcagcga
ctctttttacgtcgcgatcaattccccgaagtgttggttgatgcactcttagtcaccgaa
gatcgtgatttttatcagcacgatggcgtatcaccacttgcgattggtcgcgctatggtg
gtcaaccttaaagcggggcgcacggtgcaagggggcagtaccttgacccagcagctggct
aaaaacatcttcctttctagcgatcgcaccttgtggcgtaagctgcgcgaagcctatatg
gcgctgatcatcgattatcgttacagcaaagatcgtattcttgaagcctatcttaacgaa
gtttatttagggcaaagtggcgcagatgcgatccacggttttggtctggcttcacggctc
tattttggtcagccgctgcaagagctacggattgatcaattggcattgttggttggcatg
gttaaagggccttcttattacaacccgatgcgttatgccgagcgcgctcgcgagcggcgc
gatctggtgctgaaactgatgatggagcacgatattctgacggcgccagagtaccagcaa
gcggtaactcgtccgttggatgtgcagaaaaccgcgcaaatcgctagccgtcagccagcg
tatttccagcaagtttctattgagctgaaagaaaaactgggcgacaaatttaaagcggat
tcaggattgcgggtgtttacctcgctcgatccggtttcgcagtccaaactcgagcaagcg
atccacgatcagatcccgcaattagcgaaaaccgcaggcaaagatctcgaagccgctgcg
atcgctgtggatcgtcatagtggcgaaattcgtgccatggtcggcggtaagcgaaccggt
tacgatggttttaaccgcgtgctcaatgccagtcgacaaattggttcactggtgaaacca
gcggtgtatctcacggcgttagcgcatcccgatcagtacaacctagccactacactggaa
gataaaccactcaccttaaaaggcagtgaaggcagcgcgtggactccgcgaaactacgat
cgtcaatatcgtggagaggtgcccctttatttggcgctcgctcaatcgcttaatgtgccg
accgtggctttggggatgaagcttgggattgatcaagtctcagcaaccttgggtaagctc
ggcgtgaatcgcgacgaaattcgccctgtcccttcgatgttgctcggttcattctcactc
acgccatatcaagtggcgcagatgtatcaaacgttgaccaattccggcaaaaaagccccg
ctgtcagcgctacgttctgtgctcgatttggaaggcaatgtgctgtatgaatctctgccg
agagtgtcacaagcggtggatcagcaagccgcttggctgacgacttacgcgatgaaacaa
ggggtgcaagaggggactggacgttacttgaatgcgcagttcagcagtgcagcactggcg
gggaaaaccgggaccactaacgataaccgtgacagttggtttgtgggggtcgatggccgt
gaagtgaccaccatttggcttggccgcgatgataaccagccaacgaagctcactggcgcg
agtggggcattacgtgtttatgcgcagtatttgaaatatcgcattccagagaaattacag
ttaccttggccagaaggcataacgaccttcggctttgccaagcagacgcaaggtggattg
aaactcgactgtgataatgcgtttaaactgcctatttgggacaatcaacagcagttaaaa
cagcagtgtgaaaaccgtccgaccgagtggatcaaaaagctgtttgagtggtaa
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