Vibrio cholerae O1 El Tor FJ147: IR04_08035
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Entry
IR04_08035 CDS
T03827
Name
(GenBank) sugar ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Pathway
vcf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IR04_08035
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcf02000
]
IR04_08035
Transporters [BR:
vcf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
IR04_08035
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Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
TniB
SMC_N
AAA_22
AAA
PRK
AAA_25
AAA_16
AAA_18
Rad17
Motif
Other DBs
NCBI-ProteinID:
AJZ99095
LinkDB
All DBs
Position
I:complement(638087..639070)
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AA seq
327 aa
AA seq
DB search
MTTPLISIRNLCVDYITDAGDVRACNNVSFDLAPGEVFGLAGESGCGKSTVAFSLMRLHK
PPAFITGGEVIFNGEDILKYSDERMQAFRWKEMSMVFQSAMNALNPVLTMEEQFCDVITR
HTNMTREQAKRRAEGLLEIVDIHPSRLNDYPHQFSGGMRQRLVIAIALALNPKMIIMDEP
TTALDVVVQREILQKIYALKEEFGFSILFITHDLSLMVEFSDRIGIMYSGELIEVAPSKQ
ILETPYHPYTKGLGSSFPPLTGPKTKLTGIPGNPLNLLDIPQGCRFQARCDRVHEACTKV
PTVLRQIEHGRFSNCHLYTQSNATIKR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgactacgccattaatctcaatccgcaacttatgcgtggactacattaccgatgctggt
gacgtccgtgcctgtaacaatgtgagctttgatttagcccccggcgaggtgtttggcctt
gcgggtgaatccggctgtggtaaatccaccgttgccttctcgctgatgcgcctgcataag
ccgcccgcgttcatcactggtggcgaggtgatcttcaacggtgaagacatcctgaaatac
agtgatgagcgcatgcaagcgttccgttggaaagaaatgtcgatggtatttcaaagtgcg
atgaacgcgctgaacccagttctgaccatggaagagcaattttgcgatgtgatcacgcgc
cataccaatatgacgcgtgaacaagccaaacgtcgtgctgaagggctgttagaaattgtg
gatattcacccaagccgtcttaacgattatccgcaccagttctcgggtggtatgcgtcaa
cgcttggtgattgcaattgcgctcgcgctcaatccaaaaatgatcattatggatgaacct
acgaccgcgctagatgttgtcgttcagcgtgaaattctgcagaagatctacgcactcaaa
gaagagtttggtttctctattctgttcattactcatgacttgtcactgatggtcgagttc
tcagaccgtatcggcatcatgtactccggtgaattgattgaagtggctccttcaaaacaa
attctggaaaccccttaccacccttataccaaagggttgggaagttcttttccaccatta
actggaccaaaaacaaaactcacagggatccctggaaacccactcaacctgttggacatt
cctcaaggttgccgtttccaagctcgctgtgaccgagttcatgaagcttgtactaaggta
ccgaccgtactgcgccaaatcgagcatggccgcttttctaactgccatctctatacgcaa
tcgaacgccactataaaacgctaa
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