Vibrio cholerae O1 El Tor FJ147: IR04_08165
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Entry
IR04_08165 CDS
T03827
Symbol
nusA
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
Brite
KEGG Orthology (KO) [BR:
vcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcf03021
]
IR04_08165 (nusA)
03009 Ribosome biogenesis [BR:
vcf03009
]
IR04_08165 (nusA)
Transcription machinery [BR:
vcf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
IR04_08165 (nusA)
Ribosome biogenesis [BR:
vcf03009
]
Prokaryotic type
rRNA transcription factors
IR04_08165 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
S1_2
KH_KhpA-B
DUF3053
DUF2187
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AJZ99118
LinkDB
All DBs
Position
I:669429..670916
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AA seq
495 aa
AA seq
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MSKEILAVVEAVSNEKAVPRERIFEALETALATSTKKKYEIEIDVRVAIDRKTGAFETFR
RWLVVENVEHPTKEISFEAASFDDDSVQLGDYIEDQIESVTFDRITTQTAKQVIVQKVRE
AERAQIVEQFIDNEGELVTGVVKKVNRETVILDLGNNAEAVILREDQLPRENFRPGDRVR
GLLYKVAPEARGFQLFITRSKPEMLAELFRVEVPEIGEELIELKAAARDPGSRAKIAVKT
NDKRIDPVGACVGMRGARVQAVSGELGGERIDIVLWDDNPAQFVINAMAPADVASIIMDE
DAHSMDIAVEADNLAQAIGRNGQNVRLASQLTGWELNVMTVADLQKKHQEESMASIENFM
KYLDIEQDFAELLVEEGFSTLEEIAYVPMNELLDVDGMDEDLADELRSRAKEALTTIALA
KEESFEGLEPAEDLLALAGLERDMAFKLAAKGVATLEDLADQGVDDLEGIEGLTEQRAGE
LIMAARNICWFGEDA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagaaattttagcggtagttgaggcggtttctaacgagaaagcggtacctcgt
gagcgtatttttgaagcgctggaaactgcgttagcgacttcaaccaaaaagaagtatgaa
atcgagatcgatgtgcgcgtagccatcgatcgcaaaacaggtgcgtttgaaacgttccgc
cgttggttagtggttgagaatgttgagcacccaaccaaagagatctcatttgaagcggcg
agctttgatgatgactcggttcaactgggtgactatatcgaagatcagatcgaatcagta
acctttgaccgtattaccacgcaaactgcgaaacaagtgatcgtacaaaaagtgcgtgaa
gcagaacgtgcacagattgttgaacaattcatcgataacgaaggtgaattggtgactggt
gtagtgaagaaagtgaaccgtgaaaccgtgatcctcgatctgggtaacaacgctgaagcg
gttatcctacgtgaagatcaactgccacgcgaaaacttccgtcctggcgatcgtgttcgt
ggtttgctgtacaaagtggctccagaagcacgtggtttccaactcttcatcactcgttct
aagccagaaatgttggcagaactgttccgtgtagaagttccagaaattggtgaagagctg
attgagctgaaagcggctgcgcgtgatcctggttcacgtgccaagatcgcggtaaaaacc
aatgataagcgtatcgaccctgttggtgcgtgtgtgggtatgcgtggtgcacgtgtacaa
gcggtttctggcgaactgggtggcgagcgtattgatatcgttttgtgggatgataaccca
gcgcaattcgtcattaatgccatggcaccagccgatgtggcatcgatcattatggatgaa
gatgcacactcaatggatatcgctgttgaggctgataaccttgcgcaagcgatcggtcgt
aacggtcaaaacgtacgtttggcttctcaactgaccggttgggaactgaatgtgatgacg
gttgcggatctacagaagaaacaccaagaagagtcaatggcatccatcgagaacttcatg
aagtatctcgatattgagcaagattttgctgagctgctggttgaagaaggcttctctacg
ctagaagagatcgcttacgtaccaatgaatgagctgcttgatgttgatggcatggatgaa
gatctggcagatgagctacgtagtcgtgcgaaagaagcgctgacgacgattgctttggca
aaagaagagtcgttcgaaggccttgagcctgcagaagatctgcttgcattagcaggactg
gaacgcgacatggcattcaaactggcagcgaaaggtgttgcgacactggaagatctggct
gaccaaggtgtggatgatttagaaggtattgaaggtctgaccgaacagcgtgcgggtgag
cttattatggcggctcgtaacatttgttggtttggtgaagacgcataa
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