Vibrio cholerae O1 El Tor FJ147: IR04_08245
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Entry
IR04_08245 CDS
T03827
Name
(GenBank) c-di-GMP phosphodiesterase
Organism
vcf
Vibrio cholerae O1 El Tor FJ147
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PDU_like
GGDEF_2
HCP
Motif
Other DBs
NCBI-ProteinID:
AJZ99134
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Position
I:complement(687213..689270)
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AA seq
685 aa
AA seq
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MTKFRKIHSLAFKQAKSVFLVSVLLGLCFSFYHTLSDLHQEQSKVQEHYNFKLVQSYENA
SQAAYHLNNLLAEQVATTLMLDPGIFKVEIVDDFGDVMTRKEKAISEQSQLVSVLASYLT
PAVSVFSAELHQPNSNVVVGKLSFYIDGSSIAKVFIAKTTRVLLFDLLRNTLLTTILLLF
FYQKLSRPITMLITWVNSLNDTQRSPLPLRLTHDDELSELASTFQSMWKGKELAESKLNQ
LAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGVLFYLDLDRFKTINDSLGHTIGDQLI
KAVALRMEAWTKNDYLSARIGGDEFAVLIPYLSPAKAEEVAKQLLTLISNPYAVDDHQFY
CTVSIGISVFPSVGSCNIDVLRQADTALYRAKASGRNKFMFYEPEMQAQVESFLEIEKGL
HEALNQRQLELFYQPQVDEQHNIIGVEALIRWNHPKRGLLPPGVFMPIAEETGQILPIGN
WIIEQACYQYAQWKKQGILPPHFRRLAINISPLQFAQESFIEQVNHALRQAGITGEPIEL
EITESLLLENVESAIEKMAKLKESQISISIDDFGTGYSSLRYLKHLAVDVLKIDRSFVNQ
LHLDDNDQAIVDTILAIARKLNLEVIAEGVEDTSELAALKKLGCNQFQGYLFDKPLRAEE
IAQRFVSNSYRKIQTLPVATNSLQK
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatttcgcaagattcattctttggcctttaagcaagccaaaagcgtgttttta
gtctctgtactgttgggactctgttttagtttttaccacaccttgtccgacctgcaccaa
gagcagagcaaggtgcaggagcactataactttaaattggtgcagagttatgaaaacgcc
agtcaagcggcttaccatcttaataatctactcgccgagcaagtcgccaccaccttgatg
ctcgaccccggcatattcaaagtggagattgtggatgactttggcgatgtgatgacccgt
aaagaaaaagcaatcagtgaacagagtcaattagtcagtgtactcgccagctatcttact
cctgcggtttccgtgtttagtgccgagctgcatcagcctaactccaacgtggtggtcggc
aaactgagcttctatatcgatggctcgtcaatagccaaagtgttcatcgccaaaaccact
cgcgtactgctcttcgacctattacgtaatacgctattgacgaccattttactgctgttt
ttctaccaaaagctctctcgcccaatcaccatgctgatcacttgggttaactcactcaat
gacacacagcgctcacctctgcctcttcgtcttactcatgacgatgaactcagtgagctc
gcgtcgacgtttcaatcgatgtggaaaggcaaagagctggcagaatcgaaactcaatcaa
ttggcttattatgacagcctcacaggcctcgccaatcgcagtttgttgctgcaaaaattg
agtgatgcgattgaaactgcgcaaaactcgcatagcacaggcgtactgttctatctcgac
ttggatcgctttaaaactattaatgactcactcggtcataccatcggtgaccagttgatt
aaagccgtggcgctgcgtatggaggcatggactaaaaacgactacctgtcagcacgaatt
ggtggcgatgagttcgcagtgctgatcccttatctctcgcctgcgaaagctgaggaagtg
gccaagcagctactcactctgatttccaacccttatgcggtggacgatcaccagttctac
tgtaccgtgagtatcgggatttcggttttcccttccgtaggaagctgtaatattgatgta
ttacgtcaagcggataccgcactgtatcgcgccaaagccagtgggcgtaacaagttcatg
ttctatgagccggaaatgcaggcgcaggtggagtctttccttgaaattgaaaaaggcttg
catgaagcgctcaatcagcgccaactcgagcttttctaccaacctcaggtcgacgagcag
cacaacattattggtgtcgaagcgctgatccgctggaaccatcctaaacgagggttgttg
cctcccggtgtttttatgccgatcgcagaagaaacaggacaaattttaccgataggcaac
tggatcattgagcaagcgtgttatcaatatgcccagtggaaaaaacaaggcattttaccg
ccccattttcgccgtttggcgatcaatatcagcccactacagtttgctcaggagtctttt
attgagcaggtgaaccacgctttacgccaagcagggatcacgggggagccgatagaatta
gagataactgaaagcttactgctggaaaacgttgagagcgccatagaaaaaatggccaag
ttgaaagagagccaaatcagtatttcgattgatgactttggaacaggctactcttcgctg
cgttacctcaagcatcttgcggtcgatgtgctgaaaattgaccgctcgtttgtcaatcaa
ctgcaccttgatgataacgatcaagcgatcgtcgacacaatcttagcgattgccagaaaa
ctgaatttagaagtgattgccgaaggggtggaagacacctctgagttggccgcactcaaa
aaactggggtgtaaccaattccaaggctacctgtttgataaaccgctgcgagccgaagag
attgcacagcgttttgtcagcaacagttatcgcaaaattcaaaccttacccgttgcgaca
aacagtttacaaaaatag
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