KEGG   Vibrio cholerae O1 El Tor FJ147: IR04_08370
Entry
IR04_08370        CDS       T03827                                 
Name
(GenBank) exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vcf  Vibrio cholerae O1 El Tor FJ147
Pathway
vcf03030  DNA replication
vcf03430  Mismatch repair
vcf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vcf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    IR04_08370
   03430 Mismatch repair
    IR04_08370
   03440 Homologous recombination
    IR04_08370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcf03032]
    IR04_08370
   03400 DNA repair and recombination proteins [BR:vcf03400]
    IR04_08370
Enzymes [BR:vcf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     IR04_08370
DNA replication proteins [BR:vcf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     IR04_08370
DNA repair and recombination proteins [BR:vcf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     IR04_08370
SSDB
Motif
Pfam: RNase_T Adeno_E4_34
Other DBs
NCBI-ProteinID: AJZ99156
UniProt: A0A2Z4TJJ6
LinkDB
Position
I:713876..714781
AA seq 301 aa
MTRAPAPFPLERLADIPERPEDFRLLERIPLTREPQTWPLELSPMVGDEQPMVLLDTETT
GLSADDESIIELGMVKVLYSPSAQRIVSIVDVISLYEDPGKPIPELITELTGITDEIVQG
QRIDDAMVASWLSDDPLVVAHNAQFDRPFFEKRFAAFGHLSWACSASGIDWKALGFESRK
LEYLLLRLGWFYEGHRAATDCLAMAWLFHLLPESVANLLSEADRRTVLVRAFGAPFDVKD
YLKERGYRWHDGVKGANKHWWREISEDELPQEQTYLDDLYHRGSEHAHYDYKDARNRFKA
L
NT seq 906 nt   +upstreamnt  +downstreamnt
atgacaagagccccagcgccatttccgctagagcgcctcgcggatatcccagaaagacca
gaagattttagattgctggaacggattccattaacgcgtgaaccgcagacttggccactt
gaactttctcctatggtcggtgatgaacagccaatggtgctgctcgatacagagacaacc
ggactgtctgccgatgatgagtccattattgagcttggtatggttaaggtgctttacagc
ccctctgctcagcggattgtgtcgattgttgatgtgatcagcttgtatgaagatcccggc
aagccaatccccgaactgattaccgagttaaccggtatcaccgatgagatagtgcaaggc
cagcgcattgatgatgcaatggtagcgagttggttatccgatgatccgctggtggttgca
cacaatgcacagtttgatcgtcctttctttgaaaagcggtttgccgcatttggccatcta
tcttgggcctgttcagccagtggcatagattggaaggcgctgggttttgaaagtcgaaag
cttgagtacctgctgcttcgcttaggttggttctatgaaggacaccgagctgcaaccgat
tgtttggcgatggcctggttgtttcatttgttgcccgagtccgttgcaaacttgttgtct
gaagcagacaggcgaactgtgttagttcgtgcgtttggtgcgccgtttgacgtaaaggac
tatttaaaagagcgaggttaccgctggcatgacggtgttaaaggtgccaacaaacattgg
tggcgcgaaatcagcgaagacgagttgccgcaggaacaaacttacctggatgatttgtat
catcgtggctcagaacatgcccattatgactacaaagatgcccgcaatcgatttaaagct
ttgtag

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